RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PTGR1Q14914 329 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 ATXN7L3Q14CW9 347 aaPredicted RBP13.46□□□□□ -0.25
VTI1B-204ENST00000554659 SEC23BQ15437 767 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 BBS10Q8TAM1 723 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 CD99L2Q8TCZ2 262 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 SLC25A36Q96CQ1 311 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 RTP4Q96DX8 246 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 TM9SF2Q99805 663 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 TBL1XR1Q9BZK7 514 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 HSD3B1P14060 373 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 PVALBP20472 110 aaPredicted RBP13.46□□□□□ -0.25
VTI1B-204ENST00000554659 MYF6P23409 242 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 HSD3B2P26439 372 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 MAP2K4P45985 399 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 RGS19P49795 217 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 PSMA6P60900 246 aaKnown RBP13.46□□□□□ -0.25
VTI1B-204ENST00000554659 PDGFRLQ15198 375 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 PSD4Q8NDX1 1056 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 S100A16Q96FQ6 103 aaKnown RBP13.46□□□□□ -0.25
VTI1B-204ENST00000554659 PRR11Q96HE9 360 aaPredicted RBP13.46□□□□□ -0.25
VTI1B-204ENST00000554659 PCDHB11Q9Y5F2 797 aa13.46□□□□□ -0.25
VTI1B-204ENST00000554659 MTMR11A4FU01 709 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 M0R233 179 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 MEN1O00255 615 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 ADH5P11766 374 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 AADACL4Q5VUY2 407 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 ZSWIM9Q86XI8 627 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 GID4Q8IVV7 300 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 DGAT2Q96PD7 388 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 PIP5K1AQ99755 562 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 RHCGQ9UBD6 479 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 MAB21L2Q9Y586 359 aa13.46□□□□□ -0.26
VTI1B-204ENST00000554659 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 INMT-MINDY4F8WBC2 141 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 RPP38P78345 283 aaKnown RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 CCL14Q16627 93 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 TBRG1Q3YBR2 411 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SMPDL3BQ92485 455 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 KLK6Q92876 244 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SOX17Q9H6I2 414 aaPredicted RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SMOXQ9NWM0 555 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 FAM118AQ9NWS6 357 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 ALKBH4Q9NXW9 302 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 LRRN3E7EW58 273 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 GSTM2P28161 218 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 MAPK14Q16539 360 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 LGALS12Q96DT0 336 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 FIZ1Q96SL8 496 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 LRRN3Q9H3W5 708 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SMURF1Q9HCE7 757 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 Q9N2J8 555 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SOCS2O14508 198 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 AXIN1O15169 862 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 PROM1O43490 865 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 FDXRP22570 491 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 KDELR2P33947 212 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 RING1Q06587 406 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 GINS1Q14691 196 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 KANK2Q63ZY3 851 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 KCTD9Q7L273 389 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 PCYT2Q99447 389 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 TAS2R10Q9NYW0 307 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 ABCD2Q9UBJ2 740 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 PCDHGB2Q9Y5G2 931 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 MT-ND2P03891 347 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 HOXC12P31275 282 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 PRKCZQ05513 592 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 GALNT1Q10472 559 aaPredicted RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 TRAM1Q15629 374 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 CYB5D2Q8WUJ1 264 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 TAS2R9Q9NYW1 312 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 GNG8Q9UK08 70 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 A0A0D9SEW6 157 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SLC35F4A4IF30 521 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 FLRT2O43155 660 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 GBAP04062 536 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 BMP2P12643 396 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 BCKDHAP12694 445 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 HOXD8P13378 290 aaPredicted RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF8P17098 575 aaPredicted RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 OR1E2P47887 323 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 MAD2L1BPQ15013 274 aaPredicted RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 MMAAQ8IVH4 418 aaKnown RBP13.45□□□□□ -0.26
VTI1B-204ENST00000554659 OR4K1Q8NGD4 311 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 OR5P2Q8WZ92 322 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 FBXL3Q9UKT7 428 aa13.45□□□□□ -0.26
VTI1B-204ENST00000554659 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 TMEM88BA6NKF7 163 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 E7EQ34 232 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 PDYNP01213 254 aa13.44□□□□□ -0.26
VTI1B-204ENST00000554659 GADD45AP24522 165 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms