RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 KCT2Q8NC54 265 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 OR51Q1Q8NH59 317 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF473Q8WTR7 871 aaKnown RBP9.96□□□□□ -0.82
SHMT2-215ENST00000554656 EEF1AKMT1Q8WVE0 214 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 TM4SF19Q96DZ7 209 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 CCDC126Q96EE4 140 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 CCDC120Q96HB5 630 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 GPR78Q96P69 363 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 SIGLEC12Q96PQ1 595 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 NDNQ99608 321 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 OLFM1Q99784 485 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 MRPL57Q9BQC6 102 aaKnown RBP9.96□□□□□ -0.82
SHMT2-215ENST00000554656 HES7Q9BYE0 225 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 RBCK1Q9BYM8 510 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHMT2-215ENST00000554656 MRPL46Q9H2W6 279 aaKnown RBP9.96□□□□□ -0.82
SHMT2-215ENST00000554656 MANSC1Q9H8J5 431 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 GPAMQ9HCL2 828 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 CCDC177Q9NQR7 707 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-215ENST00000554656 TMEM184CQ9NVA4 438 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 UTP6Q9NYH9 597 aaKnown RBP9.96□□□□□ -0.82
SHMT2-215ENST00000554656 COPG2Q9UBF2 871 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 PDE10AQ9Y233 779 aa9.96□□□□□ -0.82
SHMT2-215ENST00000554656 KCNE1BA0A087WTH5 132 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF860A6NHJ4 632 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 H0YIG0 161 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 EIF3FO00303 357 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-215ENST00000554656 ZBTB14O43829 449 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 DNAJB6O75190 326 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 RASAL1O95294 804 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 TGDSO95455 350 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 B3GALT4O96024 378 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 NEFHP12036 1026 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 CDH1P12830 882 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 CPA3P15088 417 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF37AP17032 561 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-215ENST00000554656 SAT1P21673 171 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 CA7P43166 264 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 AVPR1BP47901 424 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 CDKN2DP55273 166 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 ATP6V0D1P61421 351 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 RPS15AP62244 130 aaKnown RBP9.95□□□□□ -0.82
SHMT2-215ENST00000554656 IRF9Q00978 393 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 RHAGQ02094 409 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 PDAP1Q13442 181 aaKnown RBP9.95□□□□□ -0.82
SHMT2-215ENST00000554656 PCLAFQ15004 111 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 PHKG1Q16816 387 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 BTBD16Q32M84 506 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 MINDY4Q4G0A6 757 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 ABHD17BQ5VST6 288 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 GKAP1Q5VSY0 366 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-215ENST00000554656 LRRC8EQ6NSJ5 796 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 PIGWQ7Z7B1 504 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 MDS2Q8NDY4 140 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 OR5T3Q8NGG3 340 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 OR6Y1Q8NGX8 325 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 RHEBL1Q8TAI7 183 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 KCTD4Q8WVF5 259 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 TSLPQ969D9 159 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 MOCOSQ96EN8 888 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 PDLIM5Q96HC4 596 aaKnown RBP9.95□□□□□ -0.82
SHMT2-215ENST00000554656 C7orf26Q96N11 449 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 SGPP1Q9BX95 441 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 DERL2Q9GZP9 239 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 ATG10Q9H0Y0 220 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 LANCL2Q9NS86 450 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 TMCO1Q9UM00 188 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 TACC2O95359 2948 aa9.95□□□□□ -0.82
SHMT2-215ENST00000554656 CELSR1Q9NYQ6 3014 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 POLQO75417 2590 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TRGV8A0A0C4DH27 118 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 A8MUI8 341 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TMEM114B3SHH9 223 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SNX3O60493 162 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SNNO75324 88 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TSPAN12O95859 305 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SERPINE1P05121 402 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 CYC1P08574 325 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 CCDC166P0CW27 439 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 MYL2P10916 166 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ICAM2P13598 275 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ALDH3A1P30838 453 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SERPINB5P36952 375 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 NAA20P61599 178 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ADORA2A-AS1P86434 159 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 MEF2AQ02078 507 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ART3Q13508 389 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 NAE1Q13564 534 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TUBA3CQ13748 450 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 CDSNQ15517 529 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF766Q5HY98 468 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TECRLQ5HYJ1 363 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ACER2Q5QJU3 275 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 MFSD4BQ5TF39 518 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 AGTRAPQ6RW13 159 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 PAQR3Q6TCH7 311 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TMEM207Q6UWW9 146 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ZYG11AQ6WRX3 759 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms