RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 KCNAB1Q14722 419 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TPSAB1Q15661 275 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF789Q5FWF6 425 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TEDDM1Q5T9Z0 273 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TTC27Q6P3X3 843 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 FBXO38Q6PIJ6 1188 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 NAPRTQ6XQN6 538 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF782Q6ZMW2 699 aaPredicted RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 TAS2R42Q7RTR8 314 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 SLC29A4Q7RTT9 530 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CFAP206Q8IYR0 622 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 MPP5Q8N3R9 675 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ESX1Q8N693 406 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CLDN19Q8N6F1 224 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CCDC89Q8N998 374 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 EXD3Q8N9H8 876 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 DNAAF3Q8N9W5 541 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ACVR1CQ8NER5 493 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 OR52E1Q8NGJ3 308 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 FLVCR1-AS1Q8TAF5 88 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ZFPM2Q8WW38 1151 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 XAGE5Q8WWM1 108 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ELMO1Q92556 727 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 R3HDM4Q96D70 268 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 C1GALT1C1Q96EU7 318 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 MED8Q96G25 268 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ZDHHC12Q96GR4 267 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 SLC45A3Q96JT2 553 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 OR6C1Q96RD1 312 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CCM2Q9BSQ5 444 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 HGH1Q9BTY7 390 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 PITPNM3Q9BZ71 974 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 VPS37BQ9H9H4 285 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 GPN2Q9H9Y4 310 aaPredicted RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 MRM3Q9HC36 420 aaKnown RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 TCF7L1Q9HCS4 588 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TREX1Q9NSU2 369 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 SERTAD4Q9NUC0 356 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 HRASLS2Q9NWW9 162 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 SMARCAL1Q9NZC9 954 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 MARCH4Q9P2E8 410 aaPredicted RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 XPR1Q9UBH6 696 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 IL17BQ9UHF5 180 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ICKQ9UPZ9 632 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 DRG1Q9Y295 367 aaKnown RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 BTRCQ9Y297 605 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 HEBP2Q9Y5Z4 205 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 MED13Q9UHV7 2174 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 HELZ2Q9BYK8 2649 aaKnown RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 BOD1L1Q8NFC6 3051 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 OR6C74A6NCV1 312 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 WIPF3A6NGB9 483 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SLC9B1P1A6NJY1 282 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 CGB1A6NKQ9 187 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 IQCF5A8MTL0 148 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TARM1B6A8C7 271 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 MYO1CO00159 1063 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 IFRD1O00458 451 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 BTN3A3O00478 584 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 BTN3A1O00481 513 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 LIN7AO14910 233 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 NKX2-8O15522 239 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SPAG6O75602 509 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 RASSF9O75901 435 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 KIAA0754O94854 1291 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ZBTB11O95625 1053 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 GAS8O95995 478 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 FTH1P02794 183 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 IL6RP08887 468 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TPBGLP0DKB5 382 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PRKAR1AP10644 381 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 KITP10721 976 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PLA2G2AP14555 144 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PVRP15151 417 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ST6GAL1P15907 406 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 POLR2CP19387 275 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 NMBRP28336 390 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 OAS2P29728 719 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PEBP1P30086 187 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PKLRP30613 574 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 CCR7P32248 378 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 VPS41P49754 854 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PRAMEP78395 509 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 BASP1P80723 227 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ACY1Q03154 408 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 CDC20Q12834 499 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ABRQ12979 859 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 LAMB3Q13751 1172 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 IL11RAQ14626 422 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SRSF7Q16629 238 aaKnown RBP eCLIP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 CYP1B1Q16678 543 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TYSND1Q2T9J0 566 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PCID2Q5JVF3 399 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 CTSL3PQ5NE16 218 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 DEPDC1Q5TB30 811 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ATP1A1-AS1Q5TC04 95 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 LYPLAL1Q5VWZ2 237 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ANKRD22Q5VYY1 191 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SUMO4Q6EEV6 95 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SFRP4Q6FHJ7 346 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms