RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 USP45Q70EL2 814 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SSX9Q7RTT3 188 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SZRD1Q7Z422 152 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 TMCO2Q7Z6W1 182 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 DPPA2Q7Z7J5 298 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 NT5DC3Q86UY8 548 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 PDSS2Q86YH6 399 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 LACC1Q8IV20 430 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 GID4Q8IVV7 300 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 CTAGE3PQ8IX95 158 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 RNF113BQ8IZP6 322 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 EID3Q8N140 333 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 GALNT4Q8N4A0 578 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM105Q8N8V8 129 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 LEMD2Q8NC56 503 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SETD9Q8NE22 299 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 MCUQ8NE86 351 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 OR52H1Q8NGJ2 320 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF420Q8TAQ5 688 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 MAGEE2Q8TD90 523 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SNX19Q92543 992 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 FIG4Q92562 907 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 MTERF3Q96E29 417 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 PAGE5Q96GU1 130 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 PIWIL1Q96J94 861 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SERAC1Q96JX3 654 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 CAPZA3Q96KX2 299 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 RIPOR3Q96MK2 946 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 RILPQ96NA2 401 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 OR1F2PQ96R84 312 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SSX3Q99909 188 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 CITED2Q99967 270 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 VRK1Q99986 396 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 CLSTN3Q9BQT9 956 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM246Q9BRR3 403 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 CHID1Q9BWS9 393 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 GTPBP2Q9BX10 602 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 DERL2Q9GZP9 239 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 HDHD2Q9H0R4 259 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 TASP1Q9H6P5 420 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 GAREM1Q9H706 876 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 METTL8Q9H825 291 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF556Q9HAH1 456 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 C17orf75Q9HAS0 396 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 AGO4Q9HCK5 861 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SEPSECSQ9HD40 501 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 GDF3Q9NR23 364 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 DUSP22Q9NRW4 184 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 ZSCAN32Q9NX65 697 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 MAT2BQ9NZL9 334 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SH3BP4Q9P0V3 963 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 ABCD2Q9UBJ2 740 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SPASTQ9UBP0 616 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 APOBEC3BQ9UH17 382 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 AMFRQ9UKV5 643 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 ITGA11Q9UKX5 1188 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 KCNK7Q9Y2U2 307 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SNX24Q9Y343 169 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 DHRS7Q9Y394 339 aa4.24□□□□□ -1.73
ATXN3-227ENST00000554491 SRPRBQ9Y5M8 271 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 ASH1LQ9NR48 2969 aaKnown RBP4.24□□□□□ -1.73
ATXN3-227ENST00000554491 NAV2Q8IVL1 2488 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MN1Q10571 1320 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GCN1Q92616 2671 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 LCTP09848 1927 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 KLF18A0A0U1RQI7 1052 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GNG14A0A1W2PPG7 69 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 WDR27A2RRH5 827 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ISPDA4D126 451 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 EFCAB7A8K855 629 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 LOC730098B7Z3J9 87 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PRR23D1E9PI22 279 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 H3BSA7 217 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PPEF2O14830 753 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TCAPO15273 167 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 VEGFDO43915 354 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SNAP91O60641 907 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A9O60656 530 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CYTIPO60759 359 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GCATO75600 419 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 KRT36O76013 467 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SOX30O94993 753 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NADKO95544 446 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CCNE2O96020 404 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MT-CO1P00395 513 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 IFNGP01579 166 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 EPOP01588 193 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 IGHV2-70P01814 119 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CSF2P04141 144 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GP1BAP07359 652 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ANXA5P08758 320 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 IGFBP1P08833 259 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZDHHC11BP0C7U3 371 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PRR35P0CG20 571 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PRR23D2P0DMB1 279 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 THRAP10827 490 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A6P19224 532 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CHRM3P20309 590 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 IL11P20809 199 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CYP2A7P20853 494 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms