RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 OR10Z1Q8NGY1 313 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 OR2T29Q8NH02 315 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 Q96MT0 163 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 CPPED1Q9BRF8 314 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-207ENST00000553837 BBS2Q9BXC9 721 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 DYRK4Q9NR20 520 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 ASAH2Q9NR71 780 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 WBP1LQ9NX94 342 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 VNN3Q9NY84 501 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 GPRC5BQ9NZH0 403 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 FAM8A1Q9UBU6 413 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 KLK4Q9Y5K2 254 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 A0A075B6Q4 140 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 A0A0G2JMP0 313 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CD22P20273 847 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 DNAJA1P31689 397 aaKnown RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 MAGEA2P43356 314 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 RFX2P48378 723 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CLDN8P56748 225 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 RPP38P78345 283 aaKnown RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 OLR1P78380 273 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CREMQ03060 361 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 GTF2H3Q13889 308 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 GDPD4Q6W3E5 623 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CEP68Q76N32 757 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 LRRC70Q7Z2Q7 622 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CALHM3Q86XJ0 350 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 LIX1LQ8IVB5 337 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 LILRA3Q8N6C8 439 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 ZFAND1Q8TCF1 268 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 ZNF675Q8TD23 568 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CYB5D2Q8WUJ1 264 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 BARD1Q99728 777 aaKnown RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 OR51E2Q9H255 320 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 C3orf14Q9HBI5 128 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 RANGRFQ9HD47 186 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 KRT84Q9NSB2 600 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PLCXD1Q9NUJ7 323 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PSORS1C1Q9UIG5 152 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 MYO1GB0I1T2 1018 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 FAM220BPB1ANY3 271 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 SLC9A3R1O14745 358 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PCDHGA12O60330 932 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 C8GP07360 202 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CTSLP07711 333 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 TYRP14679 529 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 FPR1P21462 350 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CD72P21854 359 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 HOXA9P31269 272 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 TNFSF8P32971 234 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 GRK5P34947 590 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 LIMK1P53667 647 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PFN3P60673 137 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 SF1Q15637 639 aaKnown RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 POM121L1PQ3SYA9 428 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CCSMST1Q4G0I0 132 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 TOR1AIP1Q5JTV8 583 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CDKL4Q5MAI5 379 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 MLIPQ5VWP3 458 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PLCZ1Q86YW0 608 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 RASGRP3Q8IV61 690 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 L3MBTL4Q8NA19 623 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 DNASE1L2Q92874 299 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 SNAPC3Q92966 411 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 UBE2FQ969M7 185 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 TRNT1Q96Q11 434 aaKnown RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PITX2Q99697 317 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CHCHD6Q9BRQ6 235 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 ELOVL6Q9H5J4 265 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 SCPEP1Q9HB40 452 aa11.75□□□□□ -0.53
SHMT2-207ENST00000553837 PDP1Q9P0J1 537 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-207ENST00000553837 NOTCH4Q99466 2003 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 A0A096LPI6 279 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CCDC182A6NF36 153 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 OR2AG2A6NM03 316 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 H0YC42 278 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 PLK4O00444 970 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CTDSP2O14595 271 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 TLL1O43897 1013 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 NOS1APO75052 506 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CPNE3O75131 537 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 LEFTY1O75610 366 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CDK1P06493 297 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 PPM1AP35813 382 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 RGS6P49758 472 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 NTHL1P78549 312 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 NPRL3Q12980 569 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 GGTA1PQ4G0N0 100 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ESCO2Q56NI9 601 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 LY6G5CQ5SRR4 150 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 LRIF1Q5T3J3 769 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms