RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PROS1P07225 676 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ADRB1P08588 477 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF806P0C7X5 589 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 GLI4P10075 376 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 THRAP10827 490 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PCNAP12004 261 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CDH1P12830 882 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 IDO1P14902 403 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 POLR2CP19387 275 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CDH3P22223 829 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PRPH2P23942 346 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 EPHA3P29320 983 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ALDH4A1P30038 563 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PRDX6P30041 224 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PRDX3P30048 256 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ARRB2P32121 409 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 AHRP35869 848 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 MPLP40238 635 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CCR10P46092 362 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 GSTM5P46439 218 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ATP4BP51164 291 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 RPS15AP62244 130 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ERVK-8P63133 956 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 STX5Q13190 355 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SQSTM1Q13501 440 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 RTP5Q14D33 572 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 TCEA2Q15560 299 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CLPPQ16740 277 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ZXDCQ2QGD7 858 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 AP5B1Q2VPB7 878 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SLC9B1Q4ZJI4 515 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SGO1Q5FBB7 561 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 TMTC4Q5T4D3 741 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CGB2Q6NT52 195 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 NIPAL1Q6NVV3 410 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 DUS1LQ6P1R4 473 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 FIGLAQ6QHK4 219 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SPESP1Q6UW49 350 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 LAYNQ6UX15 382 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 LARP4Q71RC2 724 aaKnown RBP eCLIP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF771Q7L3S4 317 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PAGE2Q7Z2X7 111 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SLC25A45Q8N413 288 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 C2orf73Q8N5S3 287 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CPSF7Q8N684 471 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 FNDC5Q8NAU1 212 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR2L3Q8NG85 312 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR7G3Q8NG95 312 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR4C6Q8NH72 309 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 RP9Q8TA86 221 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 WDR48Q8TAF3 677 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 WDR20Q8TBZ3 569 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SAP25Q8TEE9 199 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 TSPEARQ8WU66 669 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 KLHL6Q8WZ60 621 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 STARD8Q92502 1023 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 USP7Q93009 1102 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 MTFMTQ96DP5 389 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CMTM5Q96DZ9 223 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PRAP1Q96NZ9 151 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR2A14Q96R47 310 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR4K3Q96R72 315 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 YIPF4Q9BSR8 244 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 DPH7Q9BTV6 452 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 MENTQ9BUN1 341 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SARGQ9BW04 601 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ACAT2Q9BWD1 397 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 GTPBP2Q9BX10 602 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ROGDIQ9GZN7 287 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 RHBGQ9H310 441 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 XKR8Q9H6D3 395 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ACSS2Q9NR19 701 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SAR1AQ9NR31 198 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 C1orf109Q9NX04 203 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CIDEBQ9UHD4 219 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF225Q9UK10 706 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 RUVBL1Q9Y265 456 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 WBP11Q9Y2W2 641 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ASB1Q9Y576 335 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SLCO1B1Q9Y6L6 691 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 AP1M2Q9Y6Q5 423 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 KNL1Q8NG31 2342 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM131Q92545 1883 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CABIN1Q9Y6J0 2220 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 ADAMTS9Q9P2N4 1935 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 CACNA1EQ15878 2313 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 KCNE1BA0A087WTH5 132 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 A0A088AWK7 358 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 ARHGAP10A1A4S6 786 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 EME2A4GXA9 379 aaPredicted RBP4.78□□□□□ -1.64
VTI1B-202ENST00000553619 MAGEB17A8MXT2 336 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 SDHDO14521 159 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 TOX3O15405 576 aaPredicted RBP4.78□□□□□ -1.64
VTI1B-202ENST00000553619 GPR42O15529 346 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 ZSCAN9O15535 394 aaPredicted RBP4.78□□□□□ -1.64
VTI1B-202ENST00000553619 FLRT2O43155 660 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 PEX11AO75192 247 aa4.78□□□□□ -1.64
VTI1B-202ENST00000553619 LDOC1O95751 146 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms