RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ELP5Q8TE02 316 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 ZNF473Q8WTR7 871 aaKnown RBP17.05■□□□□ 0.32
SHMT2-206ENST00000553529 UCN3Q969E3 161 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 MAPKAP1Q9BPZ7 522 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 MS4A8Q9BY19 250 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 OR51B5Q9H339 312 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 ACSS3Q9H6R3 686 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 PRDM9Q9NQV7 894 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 AGPAT4Q9NRZ5 378 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 CPSF2Q9P2I0 782 aaKnown RBP17.05■□□□□ 0.32
SHMT2-206ENST00000553529 ACOT9Q9Y305 439 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 ICE1Q9Y2F5 2266 aa17.05■□□□□ 0.32
SHMT2-206ENST00000553529 PRRC2CQ9Y520 2896 aaKnown RBP17.04■□□□□ 0.32
SHMT2-206ENST00000553529 ANKDD1BA6NHY2 528 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 WASHC1A8K0Z3 465 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 PSMD12O00232 456 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-206ENST00000553529 CYR61O00622 381 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 PCDH17O14917 1159 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 ICAM2P13598 275 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 CRABP2P29373 138 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 NR0B1P51843 470 aaKnown RBP17.04■□□□□ 0.32
SHMT2-206ENST00000553529 RAB38P57729 211 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 STXBP1P61764 594 aaKnown RBP17.04■□□□□ 0.32
SHMT2-206ENST00000553529 OR1C1Q15619 314 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 EXT1Q16394 746 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 ZNF766Q5HY98 468 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 UBTD2Q8WUN7 234 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 FAR2Q96K12 515 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 CDK15Q96Q40 435 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 NT5DC2Q9H857 520 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 CNOT10Q9H9A5 744 aaKnown RBP17.04■□□□□ 0.32
SHMT2-206ENST00000553529 NMRAL1Q9HBL8 299 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 PRTFDC1Q9NRG1 225 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 LRRK2Q5S007 2527 aa17.04■□□□□ 0.32
SHMT2-206ENST00000553529 TRBV11-1A0A0K0K1C0 115 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 A0A1B0GTL3 188 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 ARHGAP10A1A4S6 786 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 POC1B-GALNT4F8VUJ3 575 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 K7EPI3 171 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 LRRTM2O43300 516 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 LDB3O75112 727 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 NEURL1O76050 574 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 ETHE1O95571 254 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 IL10P22301 178 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 NAB1Q13506 487 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 ELOAQ14241 798 aaKnown RBP17.03■□□□□ 0.32
SHMT2-206ENST00000553529 SETDB1Q15047 1291 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 TECRLQ5HYJ1 363 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 RPUSD3Q6P087 351 aaKnown RBP17.03■□□□□ 0.32
SHMT2-206ENST00000553529 GOLGA7Q7Z5G4 137 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 MYLK4Q86YV6 388 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-206ENST00000553529 OR4N5Q8IXE1 308 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 BCORP1Q8N888 145 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 APCDD1LQ8NCL9 501 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 NR4A3Q92570 626 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 NSUN5Q96P11 429 aaKnown RBP17.03■□□□□ 0.32
SHMT2-206ENST00000553529 PAFAH2Q99487 392 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 RNF32Q9H0A6 362 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 EHD1Q9H4M9 534 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 KCMF1Q9P0J7 381 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 OPTCQ9UBM4 332 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 SH3BGRL2Q9UJC5 107 aa17.03■□□□□ 0.32
SHMT2-206ENST00000553529 A0A087X1B8 175 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 URADA6NGE7 173 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 FOXO6A8MYZ6 492 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 B3GALT2O43825 422 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 UNC5CO95185 931 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 KLHL2O95198 593 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 RASAL1O95294 804 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 CYC1P08574 325 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 FAM153BP0C7A2 387 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 EDN3P14138 238 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 GCAP28676 217 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 TYK2P29597 1187 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 RFC3P40938 356 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 NEK2P51955 445 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 OC90Q02509 493 aaPredicted RBP17.02■□□□□ 0.32
SHMT2-206ENST00000553529 SLC13A2Q13183 592 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 E2F2Q14209 437 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 MEP1AQ16819 746 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 FAM153CQ494X1 144 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 RNFT1Q5M7Z0 435 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 CDKL4Q5MAI5 379 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 ZNF787Q6DD87 383 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 TRIM40Q6P9F5 258 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 DGAT2L6Q6ZPD8 337 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 NCCRP1Q6ZVX7 275 aaPredicted RBP17.02■□□□□ 0.32
SHMT2-206ENST00000553529 FJX1Q86VR8 437 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 OR7G3Q8NG95 312 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 DCAKDQ8WVC6 231 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 SLC44A1Q8WWI5 657 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 NCLNQ969V3 563 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 ZNF354BQ96LW1 612 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 FMO2Q99518 471 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.32
SHMT2-206ENST00000553529 EFCAB11Q9BUY7 163 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 PRM3Q9NNZ6 103 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 FBXW2Q9UKT8 454 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 NFU1Q9UMS0 254 aa17.02■□□□□ 0.32
SHMT2-206ENST00000553529 DAPP1Q9UN19 280 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms