RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PLA2G16P53816 162 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 KCNK10P57789 538 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 STXBP1P61764 594 aaKnown RBP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CHIT1Q13231 466 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 INAQ16352 499 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 FAM180AQ6UWF9 173 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 RAPH1Q70E73 1250 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 LAS2Q8IYD9 372 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 KRT78Q8N1N4 520 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 ARMC10Q8N2F6 343 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 BCORP1Q8N888 145 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 FAM47BQ8NA70 645 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 TTLQ8NG68 377 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 STAG3L4Q8TBR4 150 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF473Q8WTR7 871 aaKnown RBP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CCT6BQ92526 530 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 ISL2Q96A47 359 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 SCMH1Q96GD3 660 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF354BQ96LW1 612 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 MAGEB10Q96LZ2 347 aaPredicted RBP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 EFCAB11Q9BUY7 163 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CAPS2Q9BXY5 557 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 OLAHQ9NV23 265 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF358Q9NW07 568 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 ANKRD10Q9NXR5 420 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 KCMF1Q9P0J7 381 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 TEX15Q9BXT5 2789 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF407Q9C0G0 2248 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 A1L4Q6 167 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 GABRR3A8MPY1 467 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 A8MUA0 341 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 SUPT3HB4E1H0 165 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 K7EPI3 171 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 RTCAO00442 366 aaKnown RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 CLGNO14967 610 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 PRKNO60260 465 aaPredicted RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 SUPT3HO75486 399 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 LIM2P55344 173 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 RAB38P57729 211 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 AP2B1P63010 937 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 SKP1P63208 163 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 IRF8Q02556 426 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 ACTN3Q08043 901 aaPredicted RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 SETDB1Q15047 1291 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 TECRLQ5HYJ1 363 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 FAM219BQ5XKK7 198 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 LGI4Q8N135 537 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 RHEBL1Q8TAI7 183 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 SLC44A1Q8WWI5 657 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 NPLQ9BXD5 320 aaPredicted RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 REXO4Q9GZR2 422 aaKnown RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 CDCP1Q9H5V8 836 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 ABI3Q9P2A4 366 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 DAPP1Q9UN19 280 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 PPIEQ9UNP9 301 aaKnown RBP12.18□□□□□ -0.46
NPAS3-209ENST00000551008 OSGIN2Q9Y236 505 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 SLC5A6Q9Y289 635 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 ACOT9Q9Y305 439 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 MMACHCQ9Y4U1 282 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 CACNA1CQ13936 2221 aa12.18□□□□□ -0.46
NPAS3-209ENST00000551008 A0A087X1B8 175 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 A0A096LPK6 155 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 ANKDD1BA6NHY2 528 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 TMEM200CA6NKL6 621 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 SCELO95171 688 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 ACSL3O95573 720 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 DDAH2O95865 285 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 STSP08842 583 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 TPP2P29144 1249 aaPredicted RBP12.17□□□□□ -0.46
NPAS3-209ENST00000551008 MSH2P43246 934 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 MLF1P58340 268 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 OR1C1Q15619 314 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 MEP1AQ16819 746 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 SPINK14Q6IE38 97 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 OR7G3Q8NG95 312 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 FRMD6Q96NE9 622 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 SERINC2Q96SA4 455 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 SORBS1Q9BX66 1292 aaKnown RBP12.17□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF717Q9BY31 904 aaPredicted RBP12.17□□□□□ -0.46
NPAS3-209ENST00000551008 PRTFDC1Q9NRG1 225 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 OPTCQ9UBM4 332 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 TEKT2Q9UIF3 430 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 PCDHGB6Q9Y5F9 930 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 DNAJC13O75165 2243 aa12.17□□□□□ -0.46
NPAS3-209ENST00000551008 MYOCOSA0A1B0GUC4 107 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 ASPDHA6ND91 283 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 PSMD12O00232 456 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-209ENST00000551008 B3GALT2O43825 422 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 SH3BGRLO75368 114 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 KLHL2O95198 593 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 RASAL1O95294 804 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms