RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 RPS17P08708 135 aaKnown RBP12.65□□□□□ -0.38
NUP188-211ENST00000550219 IMPDH1P20839 514 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 ALDH3A1P30838 453 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 AGTR2P50052 363 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 RPS15AP62244 130 aaKnown RBP12.65□□□□□ -0.38
NUP188-211ENST00000550219 NAE1Q13564 534 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 FAM53BQ14153 422 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 BTBD16Q32M84 506 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 C18orf21Q32NC0 220 aaPredicted RBP12.65□□□□□ -0.38
NUP188-211ENST00000550219 ABHD17BQ5VST6 288 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 RIPOR1Q6ZS17 1223 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 C17orf64Q86WR6 236 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 C10orf107Q8IVU9 208 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 ANKRD42Q8N9B4 389 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 SUN3Q8TAQ9 357 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 PHF21BQ96EK2 531 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 L3HYPDHQ96EM0 354 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 TAAR6Q96RI8 345 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 TGIF2Q9GZN2 237 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 VN1R1Q9GZP7 353 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 TMEM184CQ9NVA4 438 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 ASB1Q9Y576 335 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 TNPO3Q9Y5L0 923 aaKnown RBP12.65□□□□□ -0.38
NUP188-211ENST00000550219 OR2W5A6NFC9 320 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 A8MUI8 341 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 H0YIG0 161 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 PCDH17O14917 1159 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 TRIM13O60858 407 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 RDH16O75452 317 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 STK16O75716 305 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 SIX3O95343 332 aaPredicted RBP12.64□□□□□ -0.39
NUP188-211ENST00000550219 NSA2O95478 260 aaKnown RBP12.64□□□□□ -0.39
NUP188-211ENST00000550219 CDH1P12830 882 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 CCND1P24385 295 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 BCL6P41182 706 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 XCR1P46094 333 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 HSPA7P48741 367 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 ST13P50502 369 aaKnown RBP12.64□□□□□ -0.39
NUP188-211ENST00000550219 HERVK_113P63132 956 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 CSNK1G2P78368 415 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 PMP22Q01453 160 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 PCDH1Q08174 1060 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 INAQ16352 499 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 UNC50Q53HI1 259 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 ZNF678Q5SXM1 525 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 HHATQ5VTY9 493 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 LIPMQ5VYY2 423 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 RPUSD3Q6P087 351 aaKnown RBP12.64□□□□□ -0.39
NUP188-211ENST00000550219 TMEM205Q6UW68 189 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 GFRALQ6UXV0 394 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 LRRC70Q7Z2Q7 622 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 ASPGQ86U10 573 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 ARFGAP2Q8N6H7 521 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 OR51Q1Q8NH59 317 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 NR4A3Q92570 626 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 TMEM237Q96Q45 408 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 TUBB6Q9BUF5 446 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 MECRQ9BV79 373 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 PCBD2Q9H0N5 130 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 ANKHQ9HCJ1 492 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 C19orf25Q9UFG5 118 aaPredicted RBP12.64□□□□□ -0.39
NUP188-211ENST00000550219 SH3BGRL2Q9UJC5 107 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
NUP188-211ENST00000550219 RP1L1Q8IWN7 2480 aaPredicted RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 ARHGAP10A1A4S6 786 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 OR5H15A6NDH6 313 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 LRRC14BA6NHZ5 514 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 K7EPI3 171 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 CDC123O75794 336 aaPredicted RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 RASAL1O95294 804 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 SLC35G6P0C7Q6 338 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 CHN1P15882 459 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 NPPBP16860 134 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 EEF1DP29692 281 aaKnown RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 GRK3P35626 688 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 GDF5P43026 501 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 TDGF1P3P51864 188 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 NAA20P61599 178 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 AP2B1P63010 937 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 MEF2AQ02078 507 aaPredicted RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 RELAQ04206 551 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 ASPHQ12797 758 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 ZRSR2Q15696 482 aaKnown RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 CAPN13Q6MZZ7 669 aaPredicted RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 LCTLQ6UWM7 567 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 THOC6Q86W42 341 aaKnown RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 NUDCD3Q8IVD9 361 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 KCT2Q8NC54 265 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 CAMKVQ8NCB2 501 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 MGARPQ8TDB4 240 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 ZNF483Q8TF39 744 aaPredicted RBP12.63□□□□□ -0.39
NUP188-211ENST00000550219 HAS2Q92819 552 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 ESAMQ96AP7 390 aa12.63□□□□□ -0.39
NUP188-211ENST00000550219 PYCR2Q96C36 320 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms