RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 SLAMF1Q13291 335 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 GALNTL6Q49A17 601 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 SPIN4Q56A73 249 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 VWA5B1Q5TIE3 1220 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 MAVSQ7Z434 540 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 CA13Q8N1Q1 262 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 IL22RA1Q8N6P7 574 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 OR51Q1Q8NH59 317 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 LRTM1Q9HBL6 345 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 PFDN4Q9NQP4 134 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 C1orf109Q9NX04 203 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 VTI1BQ9UEU0 232 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 CROTQ9UKG9 612 aa20.04■□□□□ 0.8
VPS29-206ENST00000549578 CELSR3Q9NYQ7 3312 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 A0A0A6YYD5 115 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 LOC101059948A0A1B0GTJ6 334 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 C1QTNF9BB2RNN3 333 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 C9J4A7 227 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 TMPRSS11DO60235 418 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 PEX11AO75192 247 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 SEC22BO75396 215 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 VIMP08670 466 aaKnown RBP20.03■□□□□ 0.8
VPS29-206ENST00000549578 C1QTNF9P0C862 333 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 TCN2P20062 427 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 PRPH2P23942 346 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 TPP2P29144 1249 aaPredicted RBP20.03■□□□□ 0.8
VPS29-206ENST00000549578 HK2P52789 917 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 RAE1P78406 368 aaKnown RBP20.03■□□□□ 0.8
VPS29-206ENST00000549578 OVCH1Q7RTY7 1134 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 PAGE2Q7Z2X7 111 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 ZCCHC7Q8N3Z6 543 aaKnown RBP20.03■□□□□ 0.8
VPS29-206ENST00000549578 TUBGCP3Q96CW5 907 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 PEX11GQ96HA9 241 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 EBPLQ9BY08 206 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 RBCK1Q9BYM8 510 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 MEAF6Q9HAF1 191 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 FGFR1OP2Q9NVK5 253 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 RIC8BQ9NVN3 520 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 DKK4Q9UBT3 224 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 GPN3Q9UHW5 284 aaPredicted RBP20.03■□□□□ 0.8
VPS29-206ENST00000549578 USH1CQ9Y6N9 552 aa20.03■□□□□ 0.8
VPS29-206ENST00000549578 NPIPB8E9PQR5 432 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 ZNF195O14628 629 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 CNOT3O75175 753 aaKnown RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 XCR1P46094 333 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 LIM2P55344 173 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 RPL38P63173 70 aaKnown RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 CLN3Q13286 438 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 KIAA0040Q15053 153 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 NCF4Q15080 339 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 RFTN2Q52LD8 501 aaPredicted RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 VWA2Q5GFL6 755 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 CCNYL2Q5T2Q4 361 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 MRPL14Q6P1L8 145 aaKnown RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 CYP20A1Q6UW02 462 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 FKBP10Q96AY3 582 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 C11orf24Q96F05 449 aaPredicted RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 THOC1Q96FV9 657 aaKnown RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 MAPKAP1Q9BPZ7 522 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 NPLQ9BXD5 320 aaPredicted RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 ZNF282Q9UDV7 671 aaPredicted RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 ADAM29Q9UKF5 820 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 FBXW2Q9UKT8 454 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 DAPP1Q9UN19 280 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 POLR3HQ9Y535 204 aaPredicted RBP20.02■□□□□ 0.8
VPS29-206ENST00000549578 APC2O95996 2303 aa20.02■□□□□ 0.8
VPS29-206ENST00000549578 ARHGAP10A1A4S6 786 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 TRPC5OSA6NMA1 111 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 SDHDO14521 159 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 PCDH7O60245 1069 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 JRKO75564 520 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 CAPNS1P04632 268 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 TIA1P31483 386 aaKnown RBP eCLIP20.02■□□□□ 0.79
VPS29-206ENST00000549578 DLSTP36957 453 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 ATP6AP1LQ52LC2 224 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 FAM69BQ5VUD6 431 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 TMEM151BQ8IW70 566 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 PRSS58Q8IYP2 241 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 LRRC34Q8IZ02 419 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 SNIP1Q8TAD8 396 aaKnown RBP20.02■□□□□ 0.79
VPS29-206ENST00000549578 PPP3R2Q96LZ3 170 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 WDR55Q9H6Y2 383 aaPredicted RBP20.02■□□□□ 0.79
VPS29-206ENST00000549578 AKTIPQ9H8T0 292 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 MKKSQ9NPJ1 570 aaPredicted RBP20.02■□□□□ 0.79
VPS29-206ENST00000549578 KCMF1Q9P0J7 381 aa20.02■□□□□ 0.79
VPS29-206ENST00000549578 GOLGA8QA0A0J9YX86 632 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 GOLGA8OA6NCC3 632 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 FAM227AF5H4B4 570 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 GOLGA8NF8WBI6 632 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 TERTO14746 1132 aaKnown RBP20.01■□□□□ 0.79
VPS29-206ENST00000549578 FAM58BPP0C7Q3 252 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 RNH1P13489 461 aaKnown RBP20.01■□□□□ 0.79
VPS29-206ENST00000549578 F8A1P23610 371 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 MAPK12P53778 367 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 HNRNPH2P55795 449 aaKnown RBP20.01■□□□□ 0.79
VPS29-206ENST00000549578 DNASE1L3Q13609 305 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 ERV3-1Q14264 604 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 NKG7Q16617 165 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 SLC9B1Q4ZJI4 515 aa20.01■□□□□ 0.79
VPS29-206ENST00000549578 C6orf136Q5SQH8 315 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms