RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 RHDQ02161 417 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 MLLT1Q03111 559 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 TNFAIP8L3Q5GJ75 292 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 LRRC73Q5JTD7 316 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 LGI4Q8N135 537 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 C12orf76Q8N812 135 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 NMD3Q96D46 503 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 CADM1Q9BY67 442 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 KAT8Q9H7Z6 458 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 CNOT6Q9ULM6 557 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 NENFQ9UMX5 172 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 H0YAE9 185 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SRPX2O60687 465 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 CREG1O75629 220 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 IFNA6P05013 189 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 RPL10P27635 214 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 GSSP48637 474 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 UGT3A2Q3SY77 523 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 GGTA1PQ4G0N0 100 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 MSS51Q4VC12 460 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 TNFAIP8L2Q6P589 184 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SPPL3Q8TCT6 385 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 THAP10Q9P2Z0 257 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 NOX1Q9Y5S8 564 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 IGLV3-10A0A075B6K4 115 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 LOC100506127A0A0U1RQW1 187 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 DAPL1A0PJW8 107 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 EFCAB9A8MZ26 197 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SCAMP2O15127 329 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 ZNF20P17024 532 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 FOXN2P32314 431 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 TSFMP43897 325 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 RPL34P49207 117 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 PNCKQ6P2M8 343 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 FRRS1Q6ZNA5 592 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 ERMP1Q7Z2K6 904 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 UBTD2Q8WUN7 234 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 MMABQ96EY8 250 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SLC45A3Q96JT2 553 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 ZNF570Q96NI8 536 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 ARHGAP9Q9BRR9 750 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 TRIM36Q9NQ86 728 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 KCTD3Q9Y597 815 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 LINC01553A4QN01 128 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 MUSKO15146 869 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 POLR1CO15160 346 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SLC35E2BP0CK96 405 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 ICAM2P13598 275 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 HTR3AP46098 478 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 E2F1Q01094 437 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SLC10A2Q12908 348 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 PON3Q15166 354 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SIX1Q15475 284 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 PIM3Q86V86 326 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 ZSWIM9Q86XI8 627 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 NT5C3BQ969T7 300 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SLC46A2Q9BY10 475 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 PAIP1Q9H074 479 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 MARCH5Q9NX47 278 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 TBX21Q9UL17 535 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 HCFC2Q9Y5Z7 792 aa8.89□□□□□ -0.99
PPFIA2-216ENST00000549396 SLC22A1O15245 554 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 PSIP1O75475 530 aaKnown RBP8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 GSK3BP49841 420 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 ARHGDIBP52566 201 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 HMGCS1Q01581 520 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 LRRC26Q2I0M4 334 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 UNC50Q53HI1 259 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 VWA5B1Q5TIE3 1220 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 MLIPQ5VWP3 458 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 C3P1Q6ZMU1 363 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 CBR4Q8N4T8 237 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 NTMT1Q9BV86 223 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 ELL3Q9HB65 397 aaPredicted RBP8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 TCF7L1Q9HCS4 588 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 TRPV5Q9NQA5 729 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 TESMINQ9Y4I5 508 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 FAM170BA6NMN3 283 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 KHNYNO15037 678 aaKnown RBP8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 AP1G1O43747 822 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 MTX2O75431 263 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 SIX3O95343 332 aaPredicted RBP8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 BCHEP06276 602 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 AQP1P29972 269 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 VIPR2P41587 438 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 TUBA1BP68363 451 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 TUBA4AP68366 448 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 NKX3-2P78367 333 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 DSG2Q14126 1118 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 ARL9Q6T311 187 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 C5orf46Q6UWT4 87 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 BAIAP2L2Q6UXY1 529 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 TUBA1AQ71U36 451 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 P2RY8Q86VZ1 359 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 ANKFN1Q8N957 763 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 JSRP1Q96MG2 331 aaPredicted RBP8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 LPAR4Q99677 370 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 ZNF576Q9H609 170 aa8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 MRPL39Q9NYK5 338 aaKnown RBP8.88□□□□□ -0.99
PPFIA2-216ENST00000549396 ING4Q9UNL4 249 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms