RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 FCHO1O14526 889 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNHIT1O43257 154 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 ASNA1O43681 348 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 CD1DP15813 335 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 CD22P20273 847 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 CERS1P27544 350 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 GGT5P36269 586 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 HSD17B7P56937 341 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 CDSNQ15517 529 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 OR4D1Q15615 310 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 NCCRP1Q6ZVX7 275 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 FGD2Q7Z6J4 655 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 KRT78Q8N1N4 520 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 GHDCQ8N2G8 530 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 FAM47BQ8NA70 645 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 PDPRQ8NCN5 879 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 BBOF1Q8ND07 529 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 OR2L5Q8NG80 312 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 ADAMTS18Q8TE60 1221 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 PYROXD1Q8WU10 500 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 WDR34Q96EX3 536 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 TSPAN17Q96FV3 270 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 CSF3RQ99062 836 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 RBBP8Q99708 897 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 SAYSD1Q9NPB0 183 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 PRTFDC1Q9NRG1 225 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 GRHL1Q9NZI5 618 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 WHRNQ9P202 907 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 RNF14Q9UBS8 474 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 MEMO1Q9Y316 297 aa16.23■□□□□ 0.19
CHMP1A-205ENST00000548650 OTOGQ6ZRI0 2925 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 FAM159BA6NKW6 160 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 B3GALT2O43825 422 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 H2AFYO75367 372 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CCDC166P0CW27 439 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 ESRRAP11474 423 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 EPORP19235 508 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 TFEBP19484 476 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 AGAP20933 346 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 HSPA7P48741 367 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CLCN2P51788 898 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 GPR143P51810 404 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 PLA2G16P53816 162 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CDKL4Q5MAI5 379 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 ABHD17CQ6PCB6 329 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 XKRXQ6PP77 449 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 GPSM1Q86YR5 675 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CDKL2Q92772 493 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 NCLNQ969V3 563 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 ESAMQ96AP7 390 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 TMEM125Q96AQ2 219 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 VMP1Q96GC9 406 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CPNE1Q99829 537 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CAPS2Q9BXY5 557 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 REXO4Q9GZR2 422 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CNOT10Q9H9A5 744 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 CHST11Q9NPF2 352 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 PNO1Q9NRX1 252 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 KLF13Q9Y2Y9 288 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 ASB1Q9Y576 335 aa16.22■□□□□ 0.19
CHMP1A-205ENST00000548650 PDZD2O15018 2839 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 A0A088AWK7 358 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 FAM187AA6NFU0 413 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 CYR61O00622 381 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 EIF3HO15372 352 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 RAD51CO43502 376 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ITGA10O75578 1167 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ABOP16442 354 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 STMN1P16949 149 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNF10P21506 573 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 PTGER1P34995 402 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 PTGER4P35408 488 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 GP5P40197 560 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 MEOX1P50221 254 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 LIM2P55344 173 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ATP6V0D1P61421 351 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 CALCOCO2Q13137 446 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 SLC13A2Q13183 592 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 DOC2AQ14183 400 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 PDK4Q16654 411 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 SULT1C3Q6IMI6 304 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 TRIM40Q6P9F5 258 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNF595Q8IYB9 648 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 CYP4Z2PQ8N1L4 340 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 SNX31Q8N9S9 440 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 POGLUT1Q8NBL1 392 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 AGAP11Q8TF27 550 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 PTCD3Q96EY7 689 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 UBXN10Q96LJ8 280 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 PHF12Q96QT6 1004 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 SERINC2Q96SA4 455 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ERP44Q9BS26 406 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 EFCAB11Q9BUY7 163 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ADAP2Q9NPF8 381 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 TXNDC16Q9P2K2 825 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 FBXW2Q9UKT8 454 aa16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNF490Q9ULM2 529 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-205ENST00000548650 MRPS33Q9Y291 106 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms