RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 NECTIN3Q9NQS3 549 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 PRDM9Q9NQV7 894 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 STMN3Q9NZ72 180 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 XPR1Q9UBH6 696 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 TEKT2Q9UIF3 430 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 CLEC18AA5D8T8 446 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 SAP18O00422 153 aaKnown RBP13.6□□□□□ -0.23
SEC23A-204ENST00000548032 RIPK2O43353 540 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 KLK8O60259 260 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 SMIM24O75264 130 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 ABHD2P08910 425 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 SNRPAP09012 282 aaKnown RBP13.6□□□□□ -0.23
SEC23A-204ENST00000548032 EEF1DP29692 281 aaKnown RBP13.6□□□□□ -0.23
SEC23A-204ENST00000548032 MTTPP55157 894 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 RAB38P57729 211 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 SLC26A5P58743 744 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 GTF2H2Q13888 395 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 NR6A1Q15406 480 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 TSNAXIP1Q2TAA8 658 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 ADPRMQ3LIE5 342 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 TEX35Q5T0J7 233 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 LGSNQ5TDP6 509 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 GRHL2Q6ISB3 625 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 GTF2H2CQ6P1K8 395 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 CLEC18BQ6UXF7 455 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 GOLGA7Q7Z5G4 137 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 RNF175Q8N4F7 328 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 CLEC18CQ8NCF0 446 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 OR7G3Q8NG95 312 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 KCNC2Q96PR1 638 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 MS4A8Q9BY19 250 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 IPPKQ9H8X2 491 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 MMP25Q9NPA2 562 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 PRTFDC1Q9NRG1 225 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 NTNG1Q9Y2I2 539 aa13.6□□□□□ -0.23
SEC23A-204ENST00000548032 TNPO3Q9Y5L0 923 aaKnown RBP13.6□□□□□ -0.23
SEC23A-204ENST00000548032 NOTCH2Q04721 2471 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 CLDN4O14493 209 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 SERPINB1P30740 379 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 TSFMP43897 325 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 PIK3CGP48736 1102 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 ST13P50502 369 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 TNFSF10P50591 281 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 HNRNPFP52597 415 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 LIM2P55344 173 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 TAS2R50P59544 299 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 SLC13A2Q13183 592 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 E2F2Q14209 437 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 PCBP2Q15366 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 TMEM35AQ53FP2 167 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 ACER2Q5QJU3 275 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 CHSY3Q70JA7 882 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 UBE3DQ7Z6J8 389 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 CLNKQ7Z7G1 428 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 LAS2Q8IYD9 372 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 BEST3Q8N1M1 668 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 KIF2BQ8N4N8 673 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 SRFBP1Q8NEF9 429 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 HUS1BQ8NHY5 278 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 SUN3Q8TAQ9 357 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 HAS2Q92819 552 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 ATP6V1E2Q96A05 226 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 CMTM7Q96FZ5 175 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF354BQ96LW1 612 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 CSF3RQ99062 836 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 OR51B5Q9H339 312 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 PRDM7Q9NQW5 492 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 PNO1Q9NRX1 252 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 AGPAT4Q9NRZ5 378 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 MRPS33Q9Y291 106 aaKnown RBP13.59□□□□□ -0.23
SEC23A-204ENST00000548032 MMACHCQ9Y4U1 282 aa13.59□□□□□ -0.23
SEC23A-204ENST00000548032 DOCK10Q96BY6 2186 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 IGKV3D-11A0A0A0MRZ8 115 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 TRAV17A0A0B4J275 112 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 TCRBV16S1A1N1A0A5B0 115 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 E2F3O00716 465 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 COL6A2P12110 1019 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 GP1BBP13224 206 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 GCAP28676 217 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 SSR2P43308 183 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 RAP1GDS1P52306 607 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 PCDH1Q08174 1060 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 RCN2Q14257 317 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 SLC29A2Q14542 456 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEC23A-204ENST00000548032 MEP1AQ16819 746 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 EIF2S3LQ2VIR3 472 aaKnown RBP13.58□□□□□ -0.24
SEC23A-204ENST00000548032 AP5B1Q2VPB7 878 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 KHDRBS2Q5VWX1 349 aaKnown RBP13.58□□□□□ -0.24
SEC23A-204ENST00000548032 LIPJQ5W064 366 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 ZNF793Q6ZN11 406 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 FAM26EQ8N5C1 309 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 SLC5A8Q8N695 610 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 PRR7Q8TB68 274 aa13.58□□□□□ -0.24
SEC23A-204ENST00000548032 ADAMTS18Q8TE60 1221 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms