RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ZFP90Q8TF47 636 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 LCN9Q8WX39 176 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 C12orf43Q96C57 262 aaKnown RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 BBS4Q96RK4 519 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 QRSL1Q9H0R6 528 aaKnown RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 SLAMF7Q9NQ25 335 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 ATAD3AQ9NVI7 634 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 GPATCH2Q9NW75 528 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 FAM32AQ9Y421 112 aaKnown RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 SNX5Q9Y5X3 404 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 PIAS3Q9Y6X2 628 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 NCOR1O75376 2440 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 CACNB4O00305 520 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 FADS2O95864 444 aaKnown RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 FURINP09958 794 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 PTX3P26022 381 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TPP2P29144 1249 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 NTSR1P30989 418 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 BCL7AQ4VC05 210 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TPRG1LQ5T0D9 272 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 GCNT6Q5T4J0 391 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TTC23Q5W5X9 447 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 METTL2BQ6P1Q9 378 aaKnown RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 FBXL6Q8N531 539 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 PACRGLQ8N7B6 248 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 PIK3C3Q8NEB9 887 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 OR8J2Q8NGG1 315 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 OR5K2Q8NHB8 316 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 RPLP0P6Q8NHW5 317 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 SMPDL3AQ92484 453 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 MBOAT4Q96T53 435 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 SGPP1Q9BX95 441 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TMEM168Q9H0V1 697 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 RERGLQ9H628 205 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TAS2R9Q9NYW1 312 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TAAR2Q9P1P5 351 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 RPS6KA6Q9UK32 745 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 MAN2B2Q9Y2E5 1009 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 COMMD3-BMI1R4GMX3 469 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 BTN3A3O00478 584 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 NOL3O60936 208 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 SOX14O95416 240 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 PVRP15151 417 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 PSMB9P28065 219 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 IGFALSP35858 605 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 CDK9P50750 372 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 CTBSQ01459 385 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 DPY19L1Q2PZI1 675 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 TMEM52BQ4KMG9 183 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 KHDRBS2Q5VWX1 349 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 CWF19L1Q69YN2 538 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 AHSA2Q719I0 299 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 UBE2Q1Q7Z7E8 422 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 SLC9B2Q86UD5 537 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 IL17RCQ8NAC3 791 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 PAPD5Q8NDF8 572 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 DPEP2Q9H4A9 486 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 MRPS30Q9NP92 439 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 TBC1D29Q9UFV1 150 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 GPR34Q9UPC5 381 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 TNFRSF11BO00300 401 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 UGDHO60701 494 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ANGPTL1O95841 491 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 RETP07949 1114 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ZNF182P17025 639 aaPredicted RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 GZMMP51124 257 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ADARB1P78563 741 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 DPTQ07507 201 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 FCHO2Q0JRZ9 810 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 CALHM3Q86XJ0 350 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 RBM45Q8IUH3 476 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ADGRF3Q8IZF5 1079 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 FAM160A2Q8N612 972 aaPredicted RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 KCT2Q8NC54 265 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ITFG2Q969R8 447 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 FEVQ99581 238 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 IL1RAPQ9NPH3 570 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 HELZP42694 1942 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 AP1G1O43747 822 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 INMTO95050 263 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 GPX2P18283 190 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 POLR2CP19387 275 aaPredicted RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 C5AR1P21730 350 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 MAPK9P45984 424 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 RPS21P63220 83 aaKnown RBP12.13□□□□□ -0.47
SCAF11-209ENST00000547018 BNIP3Q12983 259 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 DUSP7Q16829 419 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 DEPDC1Q5TB30 811 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 CCDC115Q96NT0 180 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 BRF2Q9HAW0 419 aa12.13□□□□□ -0.47
SCAF11-209ENST00000547018 AHSPQ9NZD4 102 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms