RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GPR42O15529 346 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 B3GALT4O96024 378 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 PDYNP01213 254 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 HEXBP07686 556 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 FGF4P08620 206 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 CCR10P46092 362 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 RAB38P57729 211 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 CSTF3Q12996 717 aaKnown RBP13.65□□□□□ -0.22
DDX54-203ENST00000546869 DDX39BQ13838 428 aaKnown RBP13.65□□□□□ -0.22
DDX54-203ENST00000546869 MPP2Q14168 576 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 DEFB109BQ30KR1 87 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 LINC00303Q3SY05 128 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 KIRREL2Q6UWL6 708 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 QSOX2Q6ZRP7 698 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 RNF165Q6ZSG1 346 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 SHISA6Q6ZSJ9 500 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 CDYL2Q8N8U2 506 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 ACOT4Q8N9L9 421 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 SELENOMQ8WWX9 145 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 PEX11GQ96HA9 241 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 FER1L6-AS2Q96M78 137 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 UBL7Q96S82 380 aaPredicted RBP13.65□□□□□ -0.22
DDX54-203ENST00000546869 ZNF717Q9BY31 904 aaPredicted RBP13.65□□□□□ -0.22
DDX54-203ENST00000546869 VN1R1Q9GZP7 353 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 COPS7BQ9H9Q2 264 aaPredicted RBP13.65□□□□□ -0.22
DDX54-203ENST00000546869 ACSS2Q9NR19 701 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 P4HTMQ9NXG6 502 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 MS4A12Q9NXJ0 267 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 KCMF1Q9P0J7 381 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 TUBD1Q9UJT1 453 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 ADAM29Q9UKF5 820 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 MKL2Q9ULH7 1088 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 MAN2B2Q9Y2E5 1009 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 CACNA1BQ00975 2339 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 ITPR1Q14643 2758 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 SYNDIG1LA6NDD5 238 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 ZNF860A6NHJ4 632 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 CYR61O00622 381 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 ALOX12BO75342 701 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
DDX54-203ENST00000546869 ETHE1O95571 254 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 UROSP10746 265 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 HMOX2P30519 316 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 OTX2P32243 289 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 BSGP35613 385 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 SERPINB4P48594 390 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 RAP1GDS1P52306 607 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 LIM2P55344 173 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 HSD17B7P56937 341 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 FOXL2P58012 376 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 RHAGQ02094 409 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
DDX54-203ENST00000546869 ZNF793Q6ZN11 406 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 NUDCD3Q8IVD9 361 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 TMEM151BQ8IW70 566 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 ZNF595Q8IYB9 648 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 METTL4Q8N3J2 472 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 RNF175Q8N4F7 328 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 OR11G2Q8NGC1 345 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 MTFMTQ96DP5 389 aaKnown RBP13.64□□□□□ -0.23
DDX54-203ENST00000546869 SH3GL2Q99962 352 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 MECRQ9BV79 373 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 ADNPQ9H2P0 1102 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 EML4Q9HC35 981 aaKnown RBP13.64□□□□□ -0.23
DDX54-203ENST00000546869 KCNK9Q9NPC2 374 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 FARSBQ9NSD9 589 aaKnown RBP13.64□□□□□ -0.23
DDX54-203ENST00000546869 MMACHCQ9Y4U1 282 aa13.64□□□□□ -0.23
DDX54-203ENST00000546869 A0A0G2JN53 185 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 PSMD12O00232 456 aaPredicted RBP13.63□□□□□ -0.23
DDX54-203ENST00000546869 CLDN4O14493 209 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 JRKO75564 520 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 CEACAM4O75871 244 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 C8orf89P0DMQ9 161 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 SFTPCP11686 197 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 ACPPP15309 386 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 CERS1P27544 350 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 SSR2P43308 183 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 EFNA3P52797 238 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 MAGOHP61326 146 aaKnown RBP13.63□□□□□ -0.23
DDX54-203ENST00000546869 OLR1P78380 273 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 ATP1A4Q13733 1029 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 DCAF10Q5QP82 559 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 NDUFAF7Q7L592 441 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 PAGE2Q7Z2X7 111 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 TRIM46Q7Z4K8 759 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 CUZD1Q86UP6 607 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 NUDT13Q86X67 352 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 PRSS58Q8IYP2 241 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 SHISA5Q8N114 240 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 METTL21AQ8WXB1 218 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 EXTL1Q92935 676 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 ING2Q9H160 280 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 PRDM9Q9NQV7 894 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 SIRT5Q9NXA8 310 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 VPS29Q9UBQ0 182 aa13.63□□□□□ -0.23
DDX54-203ENST00000546869 C19orf25Q9UFG5 118 aaPredicted RBP13.63□□□□□ -0.23
DDX54-203ENST00000546869 MRPS33Q9Y291 106 aaKnown RBP13.63□□□□□ -0.23
DDX54-203ENST00000546869 CFAP47Q6ZTR5 3102 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms