RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 SLC18A1P54219 525 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 MAGOHP61326 146 aaKnown RBP15.86■□□□□ 0.13
CCDC38-203ENST00000546803 GALNT1Q10472 559 aaPredicted RBP15.86■□□□□ 0.13
CCDC38-203ENST00000546803 ATP1A4Q13733 1029 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 RUNX2Q13950 521 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 MINDY4Q4G0A6 757 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 MFSD4BQ5TF39 518 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 AGBL2Q5U5Z8 902 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 NUDCD3Q8IVD9 361 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 TMEM151BQ8IW70 566 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 ZCCHC7Q8N3Z6 543 aaKnown RBP15.86■□□□□ 0.13
CCDC38-203ENST00000546803 ACOT4Q8N9L9 421 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 PLPP5Q8NEB5 264 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 METTL21AQ8WXB1 218 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 EXTL1Q92935 676 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 MECRQ9BV79 373 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 VN1R1Q9GZP7 353 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 LANCL2Q9NS86 450 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 P4HTMQ9NXG6 502 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 DAPP1Q9UN19 280 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 HS3ST3B1Q9Y662 390 aa15.86■□□□□ 0.13
CCDC38-203ENST00000546803 USP24Q9UPU5 2620 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 SEC16AO15027 2179 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 A0A1W2PQ72 361 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 SAP18O00422 153 aaKnown RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 RTCAO00442 366 aaKnown RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 SOCS6O14544 535 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ALOX12BO75342 701 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 CRCPO75575 148 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ETHE1O95571 254 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 PDYNP01213 254 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 DHRS4L1P0CG22 281 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ACPPP15309 386 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 CERS1P27544 350 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 LIM2P55344 173 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 RAB38P57729 211 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 TMEM205Q6UW68 189 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 KIRREL2Q6UWL6 708 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ZNF793Q6ZN11 406 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 GBP7Q8N8V2 638 aaPredicted RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 UBL7Q96S82 380 aaPredicted RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ARHGAP9Q9BRR9 750 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 DDX31Q9H8H2 851 aaKnown RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 EML4Q9HC35 981 aaKnown RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 FARSBQ9NSD9 589 aaKnown RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 C19orf25Q9UFG5 118 aaPredicted RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ADAM29Q9UKF5 820 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 MRPS33Q9Y291 106 aaKnown RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 SPACA6W5XKT8 324 aa15.85■□□□□ 0.13
CCDC38-203ENST00000546803 ANKRD11Q6UB99 2663 aaPredicted RBP15.85■□□□□ 0.13
CCDC38-203ENST00000546803 LOC102723996A0A087X1L8 192 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 SERTM1A2A2V5 107 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 ARGFXA6NJG6 315 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 CLDN4O14493 209 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 B4GALT2O60909 372 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 C8orf89P0DMQ9 161 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 UROSP10746 265 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 RHAGQ02094 409 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 CSTF3Q12996 717 aaKnown RBP15.84■□□□□ 0.13
CCDC38-203ENST00000546803 MPP2Q14168 576 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 LINC00303Q3SY05 128 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 QSOX2Q6ZRP7 698 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 PAGE2Q7Z2X7 111 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 LSM14AQ8ND56 463 aaKnown RBP15.84■□□□□ 0.13
CCDC38-203ENST00000546803 OR11G2Q8NGC1 345 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 OR6Y1Q8NGX8 325 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 RBCK1Q9BYM8 510 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 ING2Q9H160 280 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 MS4A12Q9NXJ0 267 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 KCMF1Q9P0J7 381 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 VPS29Q9UBQ0 182 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 SLC12A4Q9UP95 1085 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 MMACHCQ9Y4U1 282 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 TIMM22Q9Y584 194 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 PTPRQQ9UMZ3 2332 aa15.84■□□□□ 0.13
CCDC38-203ENST00000546803 MDC1Q14676 2089 aaKnown RBP15.83■□□□□ 0.13
CCDC38-203ENST00000546803 TMEM120BA0PK00 339 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 BLACEA4D250 179 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 PRMT3O60678 531 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 CDC123O75794 336 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-203ENST00000546803 BSGP35613 385 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 SLAMF1Q13291 335 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 ARL13AQ5H913 290 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-203ENST00000546803 TCHHL1Q5QJ38 904 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-203ENST00000546803 DCAF10Q5QP82 559 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 CUZD1Q86UP6 607 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 NUDT13Q86X67 352 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 ZNF595Q8IYB9 648 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 METTL4Q8N3J2 472 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 GOLGA6L1Q8N7Z2 621 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 CLEC1AQ8NC01 280 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 PPP1R14CQ8TAE6 165 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 KCNA7Q96RP8 456 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 ZNF717Q9BY31 904 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-203ENST00000546803 ADNPQ9H2P0 1102 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 PRDM9Q9NQV7 894 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 NKIRAS1Q9NYS0 192 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 PHF11Q9UIL8 331 aa15.83■□□□□ 0.12
CCDC38-203ENST00000546803 TUBD1Q9UJT1 453 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms