RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 BOLA2-SMG1P6H3BVE0 249 aa15.04■□□□□ -0
CUX1-211ENST00000546411 SCAMP2O15127 329 aaKnown RBP15.04■□□□□ -0
CUX1-211ENST00000546411 OR5F1O95221 314 aa15.04■□□□□ -0
CUX1-211ENST00000546411 AOAHP28039 575 aa15.04■□□□□ -0
CUX1-211ENST00000546411 IL18R1Q13478 541 aa15.04■□□□□ -0
CUX1-211ENST00000546411 LUZP2Q86TE4 346 aa15.04■□□□□ -0
CUX1-211ENST00000546411 CBARPQ8N350 705 aaPredicted RBP15.04■□□□□ -0
CUX1-211ENST00000546411 METTL25Q8N6Q8 603 aa15.04■□□□□ -0
CUX1-211ENST00000546411 GOLM1Q8NBJ4 401 aa15.04■□□□□ -0
CUX1-211ENST00000546411 RNF31Q96EP0 1072 aa15.04■□□□□ -0
CUX1-211ENST00000546411 RBM18Q96H35 190 aaKnown RBP15.04■□□□□ -0
CUX1-211ENST00000546411 COG8Q96MW5 612 aa15.04■□□□□ -0
CUX1-211ENST00000546411 UCK2Q9BZX2 261 aa15.04■□□□□ -0
CUX1-211ENST00000546411 LTB4R2Q9NPC1 389 aa15.04■□□□□ -0
CUX1-211ENST00000546411 NKIRAS2Q9NYR9 191 aa15.04■□□□□ -0
CUX1-211ENST00000546411 WBP11Q9Y2W2 641 aaKnown RBP15.04■□□□□ -0
CUX1-211ENST00000546411 CEPT1Q9Y6K0 416 aa15.04■□□□□ -0
CUX1-211ENST00000546411 BRWD3Q6RI45 1802 aa15.04■□□□□ -0
CUX1-211ENST00000546411 GABRR3A8MPY1 467 aa15.04■□□□□ -0
CUX1-211ENST00000546411 GTPBP1O00178 669 aaKnown RBP15.04■□□□□ -0
CUX1-211ENST00000546411 CSTF2P33240 577 aaKnown RBP eCLIP15.04■□□□□ -0
CUX1-211ENST00000546411 SHMT2P34897 504 aa15.04■□□□□ -0
CUX1-211ENST00000546411 IL18Q14116 193 aa15.04■□□□□ -0
CUX1-211ENST00000546411 SLC36A3Q495N2 470 aa15.04■□□□□ -0
CUX1-211ENST00000546411 CCSMST1Q4G0I0 132 aa15.04■□□□□ -0
CUX1-211ENST00000546411 TOR1AIP1Q5JTV8 583 aa15.04■□□□□ -0
CUX1-211ENST00000546411 FOXB2Q5VYV0 432 aa15.04■□□□□ -0
CUX1-211ENST00000546411 LIPIQ6XZB0 460 aa15.04■□□□□ -0
CUX1-211ENST00000546411 CARM1Q86X55 608 aa15.04■□□□□ -0
CUX1-211ENST00000546411 ZNF740Q8NDX6 193 aa15.04■□□□□ -0
CUX1-211ENST00000546411 OR10H4Q8NGA5 316 aa15.04■□□□□ -0
CUX1-211ENST00000546411 ZNF420Q8TAQ5 688 aaPredicted RBP15.04■□□□□ -0
CUX1-211ENST00000546411 LGALS12Q96DT0 336 aa15.04■□□□□ -0
CUX1-211ENST00000546411 GPR83Q9NYM4 423 aa15.04■□□□□ -0
CUX1-211ENST00000546411 IRAK3Q9Y616 596 aa15.04■□□□□ -0
CUX1-211ENST00000546411 BRWD1Q9NSI6 2320 aa15.04■□□□□ -0
CUX1-211ENST00000546411 SLC30A4O14863 429 aa15.04■□□□□ -0
CUX1-211ENST00000546411 ATP6V1G1O75348 118 aa15.04■□□□□ -0
CUX1-211ENST00000546411 ATE1O95260 518 aa15.04■□□□□ -0
CUX1-211ENST00000546411 NHSL2Q5HYW2 709 aa15.04■□□□□ -0
CUX1-211ENST00000546411 RPS26P11Q5JNZ5 115 aaPredicted RBP15.04■□□□□ -0
CUX1-211ENST00000546411 SLC35F1Q5T1Q4 408 aa15.04■□□□□ -0
CUX1-211ENST00000546411 PPP2R2DQ66LE6 453 aa15.04■□□□□ -0
CUX1-211ENST00000546411 PEX5LQ8IYB4 626 aa15.04■□□□□ -0
CUX1-211ENST00000546411 IZUMO1Q8IYV9 350 aa15.04■□□□□ -0
CUX1-211ENST00000546411 OR2A12Q8NGT7 310 aa15.04■□□□□ -0
CUX1-211ENST00000546411 RBCK1Q9BYM8 510 aa15.04■□□□□ -0
CUX1-211ENST00000546411 SEC16AO15027 2179 aa15.04■□□□□ -0
CUX1-211ENST00000546411 NRXN2Q9P2S2 1712 aa15.04■□□□□ -0
CUX1-211ENST00000546411 CAPN5O15484 640 aaPredicted RBP15.03■□□□□ -0
CUX1-211ENST00000546411 TAPBPO15533 448 aa15.03■□□□□ -0
CUX1-211ENST00000546411 PRMT3O60678 531 aa15.03■□□□□ -0
CUX1-211ENST00000546411 SCN2BO60939 215 aa15.03■□□□□ -0
CUX1-211ENST00000546411 PFKLP17858 780 aa15.03■□□□□ -0
CUX1-211ENST00000546411 LHCGRP22888 699 aa15.03■□□□□ -0
CUX1-211ENST00000546411 UGT3A2Q3SY77 523 aa15.03■□□□□ -0
CUX1-211ENST00000546411 PARS2Q7L3T8 475 aaKnown RBP15.03■□□□□ -0
CUX1-211ENST00000546411 AKAP14Q86UN6 197 aa15.03■□□□□ -0
CUX1-211ENST00000546411 SLC22A16Q86VW1 577 aa15.03■□□□□ -0
CUX1-211ENST00000546411 MEX3DQ86XN8 651 aaKnown RBP15.03■□□□□ -0
CUX1-211ENST00000546411 ZNF433Q8N7K0 673 aaPredicted RBP15.03■□□□□ -0
CUX1-211ENST00000546411 RDH12Q96NR8 316 aa15.03■□□□□ -0
CUX1-211ENST00000546411 TRIB3Q96RU7 358 aa15.03■□□□□ -0
CUX1-211ENST00000546411 NPLQ9BXD5 320 aaPredicted RBP15.03■□□□□ -0
CUX1-211ENST00000546411 ARNTLO00327 626 aa15.03■□□□□ -0
CUX1-211ENST00000546411 MID1O15344 667 aa15.03■□□□□ -0
CUX1-211ENST00000546411 ALPPP05187 535 aa15.03■□□□□ -0
CUX1-211ENST00000546411 C1SP09871 688 aa15.03■□□□□ -0
CUX1-211ENST00000546411 CDK4P11802 303 aa15.03■□□□□ -0
CUX1-211ENST00000546411 TYRP1P17643 537 aa15.03■□□□□ -0
CUX1-211ENST00000546411 ERVFC1P60507 584 aa15.03■□□□□ -0
CUX1-211ENST00000546411 SLC13A2Q13183 592 aa15.03■□□□□ -0
CUX1-211ENST00000546411 KCNC3Q14003 757 aa15.03■□□□□ -0
CUX1-211ENST00000546411 TPRG1LQ5T0D9 272 aa15.03■□□□□ -0
CUX1-211ENST00000546411 NXPE4Q6UWF7 544 aa15.03■□□□□ -0
CUX1-211ENST00000546411 LIMS2Q7Z4I7 341 aa15.03■□□□□ -0
CUX1-211ENST00000546411 C6orf120Q7Z4R8 191 aa15.03■□□□□ -0
CUX1-211ENST00000546411 RASGEF1AQ8N9B8 481 aa15.03■□□□□ -0
CUX1-211ENST00000546411 OR8K5Q8NH50 307 aa15.03■□□□□ -0
CUX1-211ENST00000546411 ZNF689Q96CS4 500 aaPredicted RBP15.03■□□□□ -0
CUX1-211ENST00000546411 DMRTB1Q96MA1 342 aa15.03■□□□□ -0
CUX1-211ENST00000546411 GFM1Q96RP9 751 aaKnown RBP15.03■□□□□ -0
CUX1-211ENST00000546411 SPATA2Q9UM82 520 aa15.03■□□□□ -0
CUX1-211ENST00000546411 FAM240BA0A1B0GVZ2 78 aa15.03■□□□□ -0
CUX1-211ENST00000546411 OR52A4PA6NMU1 304 aa15.03■□□□□ -0
CUX1-211ENST00000546411 CENPXA8MT69 81 aa15.03■□□□□ -0
CUX1-211ENST00000546411 KMOO15229 486 aa15.03■□□□□ -0
CUX1-211ENST00000546411 TIMP2P16035 220 aa15.03■□□□□ -0
CUX1-211ENST00000546411 PCSK2P16519 638 aa15.03■□□□□ -0
CUX1-211ENST00000546411 KHKP50053 298 aa15.03■□□□□ -0
CUX1-211ENST00000546411 AFMIDQ63HM1 303 aa15.03■□□□□ -0
CUX1-211ENST00000546411 SHQ1Q6PI26 577 aaKnown RBP15.03■□□□□ -0
CUX1-211ENST00000546411 TBPL2Q6SJ96 375 aa15.03■□□□□ -0
CUX1-211ENST00000546411 PLET1Q6UQ28 207 aa15.03■□□□□ -0
CUX1-211ENST00000546411 OR4N5Q8IXE1 308 aa15.03■□□□□ -0
CUX1-211ENST00000546411 GRHL3Q8TE85 626 aa15.03■□□□□ -0
CUX1-211ENST00000546411 ZNF480Q8WV37 535 aa15.03■□□□□ -0
CUX1-211ENST00000546411 IL20RAQ9UHF4 553 aa15.03■□□□□ -0
CUX1-211ENST00000546411 FAM86C2PA6NEL3 165 aa15.03■□□□□ -0
CUX1-211ENST00000546411 SLC16A5O15375 505 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms