RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 LRIT2A6NDA9 550 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 CLOCKO15516 846 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 TPST2O60704 377 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 B4GALT2O60909 372 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 SRFP11831 508 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 POU2F1P14859 743 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 IL1RNP18510 177 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 AKT2P31751 481 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 POLE2P56282 527 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 RGNQ15493 299 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 DEFB133Q30KQ1 61 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 NKAIN2Q5VXU1 208 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 SATL1Q86VE3 508 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 FBXO15Q8NCQ5 510 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 OR5T3Q8NGG3 340 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 EVA1BQ9NVM1 165 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 ARMC1Q9NVT9 282 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 APOBEC3BQ9UH17 382 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 MAGEL2Q9UJ55 1249 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PCDHB11Q9Y5F2 797 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 ASCC3Q8N3C0 2202 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 P2RX6O15547 441 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 HNRNPRO43390 633 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PRKNO60260 465 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 VIPP01282 170 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 WNT1P04628 370 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 EPHA2P29317 976 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PKLRP30613 574 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PI4KAP42356 2102 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PRIM2P49643 509 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 RPL6Q02878 288 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 ILF3Q12906 894 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 MTAPQ13126 283 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 EIF2B5Q13144 721 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 GANABQ14697 944 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 LTB4RQ15722 352 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 AASDHQ4L235 1098 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 FAM98BQ52LJ0 330 aaKnown RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 TOR1AIP1Q5JTV8 583 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 LRIF1Q5T3J3 769 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 UGT2A3Q6UWM9 527 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 DEFB123Q8N688 67 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 OR8J2Q8NGG1 315 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 KAT2AQ92830 837 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 CENPNQ96H22 339 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 WFDC6Q9BQY6 131 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 POLMQ9NP87 494 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-202ENST00000546386 HRASLS2Q9NWW9 162 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 SCOCQ9UIL1 159 aa11.38□□□□□ -0.59
CCDC38-202ENST00000546386 UPK1AO00322 258 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 GCM2O75603 506 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PRPH2P23942 346 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PEX19P40855 299 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PIGFQ07326 219 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 HYAL2Q12891 473 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 FZD5Q13467 585 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 SMAD4Q13485 552 aaKnown RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 MAP7Q14244 749 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 FZD2Q14332 565 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 GPR19Q15760 415 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 SPDYE7PQ495Y7 208 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 FAM71E1Q6IPT2 247 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 CEP68Q76N32 757 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 ZZZ3Q8IYH5 903 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 SPPL2AQ8TCT8 520 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 CREB3L4Q8TEY5 395 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 SETD7Q8WTS6 366 aaKnown RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 TIMM29Q9BSF4 260 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PRR14Q9BWN1 585 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 GRIP2Q9C0E4 1043 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 VCX3BQ9H321 246 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 ASIC5Q9NY37 505 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 RAB23Q9ULC3 237 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 A0A1W2PR48 441 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 FAM227AF5H4B4 570 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 FOXE1O00358 373 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 ZW10O43264 779 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PRSS23O95084 383 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 LINGO3P0C6S8 592 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 F3P13726 295 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 HOXB9P17482 250 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 JUNDP17535 347 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 MAPK10P53779 464 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 SIM1P81133 766 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 VMACQ2NL98 169 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 SNAP47Q5SQN1 464 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 OR4C11Q6IEV9 310 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 KRT80Q6KB66 452 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 IRGCQ6NXR0 463 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 Q6ZPB1 254 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 USP30Q70CQ3 517 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PROSER1Q86XN7 944 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 ZNF786Q8N393 782 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms