RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 VPS29Q9UBQ0 182 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 LOC102723532A0A0G2JNH3 316 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 TRBC2A0A5B9 178 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 PIPSLA2A3N6 862 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 C12orf71A8MTZ7 269 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 HOXC11O43248 304 aaPredicted RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 DDX5P17844 614 aaKnown RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 SUOXP51687 545 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 CDC42P60953 191 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 HBA1P69905 142 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 KIAA0040Q15053 153 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 HYAL4Q2M3T9 481 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF683Q8IZ20 524 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 LILRB4Q8NHJ6 448 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 CYB5D2Q8WUJ1 264 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 TRMT61AQ96FX7 289 aaKnown RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 PKMYT1Q99640 499 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 ELAC1Q9H777 363 aaKnown RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 KLHL1Q9NR64 748 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 TBX21Q9UL17 535 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 RIMKLBQ9ULI2 386 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 DOCK6Q96HP0 2047 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 A0A1W2PQ72 361 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 MEIOCA2RUB1 952 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PCP4L1A6NKN8 68 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CLDN11O75508 207 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 GASTP01350 101 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CYP17A1P05093 508 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 HOXB8P17481 243 aaPredicted RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 APEX1P27695 318 aaKnown RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PDHA2P29803 388 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 RYKP34925 604 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CLDN8P56748 225 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PIN1Q13526 163 aaPredicted RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SCARB2Q14108 478 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ZSWIM7Q19AV6 140 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PROX2Q3B8N5 592 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PTOV1Q86YD1 416 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 TRAPPC5Q8IUR0 188 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 AADATQ8N5Z0 425 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 BBS10Q8TAM1 723 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 IGSF21Q96ID5 467 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF558Q96NG5 402 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 RDH12Q96NR8 316 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 RACGAP1Q9H0H5 632 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ABCG4Q9H172 646 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 C8orf4Q9NR00 106 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ITM2BQ9Y287 266 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PRAMEF33A0A0G2JMD5 474 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 A0A1B0GVM2 712 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 A0A1W2PQL4 384 aaPredicted RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 KDELR3O43731 214 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 LZTS3O60299 673 aaPredicted RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PRAMEF10O60809 474 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SYPP08247 313 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SRCP12931 536 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CDH4P55283 916 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 TAS2R50P59544 299 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ELAVL2Q12926 359 aaKnown RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 DUSP7Q16829 419 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 AGAP6Q5VW22 663 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CASP12Q6UXS9 341 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 C11orf65Q8NCR3 313 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 TSPEARQ8WU66 669 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 AGAP4Q96P64 663 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 DNAJC11Q9NVH1 559 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 FBXL12Q9NXK8 326 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF222Q9UK12 451 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 OR6C75A6NL08 312 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 HAT1O14929 419 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CASKO14936 926 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SLC16A6O15403 523 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CCNB2O95067 398 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SLC16A8O95907 504 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ETV3P41162 512 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 UGT2B15P54855 530 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SMUG1Q53HV7 270 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ATAT1Q5SQI0 421 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 ATG9BQ674R7 924 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 KIAA1161Q6NSJ0 714 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 CNKSR3Q6P9H4 555 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SMARCD3Q6STE5 483 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 RFPL4BQ6ZWI9 263 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 DNAJC22Q8N4W6 341 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PJA1Q8NG27 643 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 OR8H1Q8NGG4 311 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 SMAP2Q8WU79 429 aaPredicted RBP14.05□□□□□ -0.16
HOXC11-202ENST00000546378 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
HOXC11-202ENST00000546378 TRIM64A6NGJ6 449 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 H7C4K7 107 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 ERAL1O75616 437 aaKnown RBP14.04□□□□□ -0.16
HOXC11-202ENST00000546378 RETP07949 1114 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 EBLN1P0CF75 366 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 UQCRC1P31930 480 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 CD70P32970 193 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 MAPKAPK2P49137 400 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 GPR17Q13304 367 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms