RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 OR4K1Q8NGD4 311 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 OR1L3Q8NH93 324 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MGARPQ8TDB4 240 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TRPC4APQ8TEL6 797 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF501Q96CX3 271 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 PRR11Q96HE9 360 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF285Q96NJ3 590 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 OR2A5Q96R48 311 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TAAR9Q96RI9 348 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ZPBPQ9BS86 351 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 G6PC3Q9BUM1 346 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 SARGQ9BW04 601 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ASPSCR1Q9BZE9 553 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ULBP3Q9BZM4 244 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 PITHD1Q9GZP4 211 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 PRDM14Q9GZV8 571 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 DRC3Q9H069 523 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 NOL11Q9H8H0 719 aaKnown RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ZBTB26Q9HCK0 441 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MLXIPLQ9NP71 852 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MED4Q9NPJ6 270 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 FBXO8Q9NRD0 319 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 THSD1Q9NS62 852 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 SRPK3Q9UPE1 567 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MSRB2Q9Y3D2 182 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 PCDHGA7Q9Y5G6 932 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 B3GALT1Q9Y5Z6 326 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ITPR1Q14643 2758 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MGAQ8IWI9 3026 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CCDC88CQ9P219 2028 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 URB1O60287 2271 aaKnown RBP6.02□□□□□ -1.44
PRKDC-211ENST00000546304 KCNE1BA0A087WTH5 132 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 LOC105369274A0A096LPK9 316 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 LOC102723532A0A0G2JNH3 316 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 A0A1B0GTL3 188 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TRABD2BA6NFA1 517 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 CDRT15L2A8MXV6 281 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 H3BMH7 237 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 NVLO15381 856 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 BIRC5O15392 142 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ATP8B1O43520 1251 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 OR1F1O43749 312 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SRPX2O60687 465 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TRIM13O60858 407 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 H2AFYO75367 372 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SCRG1O75711 98 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 STK17BO94768 372 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 KIAA0754O94854 1291 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 CLDN9O95484 217 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 STATHP02808 62 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SERPINE1P05121 402 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 EIF2S1P05198 315 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ENO1P06733 434 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 NR1D1P20393 614 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 IMPDH1P20839 514 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 CD82P27701 267 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SERPINB1P30740 379 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 AHRP35869 848 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SERPINB5P36952 375 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 HNF4AP41235 474 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 CASP2P42575 452 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PKNOX1P55347 436 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PCBP3P57721 371 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PPP2R2AP63151 447 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 RGS1Q08116 209 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 LAPTM5Q13571 262 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 RCN2Q14257 317 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 GRM7Q14831 915 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 RBBP5Q15291 538 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 CHI3L2Q15782 390 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 HKDC1Q2TB90 917 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PRTGQ2VWP7 1150 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TBC1D25Q3MII6 688 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 HHATQ5VTY9 493 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 LIPJQ5W064 366 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ADNP2Q6IQ32 1131 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PWWP2BQ6NUJ5 590 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 MED27Q6P2C8 311 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TLDC1Q6P9B6 456 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ZCCHC23Q6ZST2 131 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 GPRIN3Q6ZVF9 776 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ASPGQ86U10 573 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 LAS2Q8IYD9 372 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 OR4N4Q8N0Y3 316 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 LSMEM2Q8N112 164 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ANKS4BQ8N8V4 417 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ANKRD53Q8N9V6 530 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 L3MBTL4Q8NA19 623 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TTC29Q8NA56 475 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 OR4F6Q8NGB9 312 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PPP1R14CQ8TAE6 165 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ZCCHC10Q8TBK6 192 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 AGAP11Q8TF27 550 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 USP7Q93009 1102 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 UBE2E3Q969T4 207 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ATP6V1E2Q96A05 226 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 REPS1Q96D71 796 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 MOCOSQ96EN8 888 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 RNF31Q96EP0 1072 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms