RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 FOXM1Q08050 763 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 LRRC74AQ0VAA2 488 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 DCAF12Q5T6F0 453 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 SAMD14Q8IZD0 417 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 TESCQ96BS2 214 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 ZBTB18Q99592 522 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 PRPF18Q99633 342 aaKnown RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 MYLK2Q9H1R3 596 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 KLHL31Q9H511 634 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 ACTR5Q9H9F9 607 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 WDR41Q9HAD4 459 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 SAR1AQ9NR31 198 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 MRPS33Q9Y291 106 aaKnown RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 CAPN7Q9Y6W3 813 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 SCN3AQ9NY46 2000 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 FER1L5A0AVI2 2057 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 NUP210LQ5VU65 1888 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 SPAARA0A1B0GVQ0 90 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 SCRG1O75711 98 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 KLHL18O94889 574 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 KLK1P06870 262 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 JMJD7P0C870 316 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 CD82P27701 267 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 RAB8AP61006 207 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 SRSF11Q05519 484 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 KLC1Q07866 573 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 BIKQ13323 160 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 DSG2Q14126 1118 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 DEFB134Q4QY38 66 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 MSANTD1Q6ZTZ1 278 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 TMPRSS7Q7RTY8 843 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 CAMKMTQ7Z624 323 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 CLNKQ7Z7G1 428 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 TMEM126BQ8IUX1 230 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 TMEM132CQ8N3T6 1108 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 LIX1Q8N485 282 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 OR1F2PQ96R84 312 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 TUBB6Q9BUF5 446 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 DPY30Q9C005 99 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 SPRTNQ9H040 489 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 ATAD3AQ9NVI7 634 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 OCIAD1Q9NX40 245 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 DLL3Q9NYJ7 618 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 DAPP1Q9UN19 280 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 DLGAP4Q9Y2H0 992 aa15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 COPG1Q9Y678 874 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-212ENST00000545856 CROCCQ5TZA2 2017 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 C1orf226A1L170 272 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 PSMD12O00232 456 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 FCHO1O14526 889 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 ANKRD28O15084 1053 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 CASC3O15234 703 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 ZNF749O43361 778 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 SLC22A3O75751 556 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 FAM58BPP0C7Q3 252 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 G6PDP11413 515 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 PRDX6P30041 224 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 PPP2R1BP30154 601 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 DIO3P55073 304 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 BTN3A2P78410 334 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 MAP7Q14244 749 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 RSPO4Q2I0M5 234 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 CCDC157Q569K6 752 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 COQ5Q5HYK3 327 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 ZNF793Q6ZN11 406 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 MTDHQ86UE4 582 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 ALYREFQ86V81 257 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 GPR180Q86V85 440 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 ZCCHC10Q8TBK6 192 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 C1orf50Q9BV19 199 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 SLC7A5P2Q9GIP4 190 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 NMUR2Q9GZQ4 415 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 SLC39A1Q9NY26 324 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 TAS2R7Q9NYW3 318 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 NAALAD2Q9Y3Q0 740 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 MAP4K5Q9Y4K4 846 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 SPTBN4Q9H254 2564 aa15.17■□□□□ 0.02
PRPF40A-212ENST00000545856 SAP18O00422 153 aaKnown RBP15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 FOXS1O43638 330 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 EEDO75530 441 aaKnown RBP15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 IL6P05231 212 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 RNH1P13489 461 aaKnown RBP15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 IL1RNP18510 177 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 DDCP20711 480 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 CERS1P27544 350 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 RAB38P57729 211 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 TNFRSF17Q02223 184 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 ABHD18Q0P651 414 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 SLAMF1Q13291 335 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 PDE7AQ13946 482 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 RCAN2Q14206 197 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 KRT72Q14CN4 511 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 TMEM198Q66K66 360 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 FAM71E1Q6IPT2 247 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 TTLL10Q6ZVT0 673 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 RIMKLAQ8IXN7 391 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 C16orf78Q8WTQ4 265 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 FKBP10Q96AY3 582 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 CMTM5Q96DZ9 223 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms