RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 DMRTB1Q96MA1 342 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 FRMD6Q96NE9 622 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 SLC2A4RGQ9NR83 387 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 C1orf226A1L170 272 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 EMC8O43402 210 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 CD9P21926 228 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 POU6F2P78424 691 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ISCA2Q86U28 154 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 DPYSL5Q9BPU6 564 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 DNAJC25-GNG10A0A024R161 153 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF726A6NNF4 738 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 DIRAS1O95057 198 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PTGR1Q14914 329 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 CBARPQ8N350 705 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 KRTCAP2Q8N6L1 136 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ZBTB8BQ8NAP8 495 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 HCAR2Q8TDS4 363 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 MCHR1Q99705 422 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 G6PC3Q9BUM1 346 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 SH3D21A4FU49 640 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 CD68P34810 354 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 SLC27A4Q6P1M0 643 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 OR8J1Q8NGP2 316 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PNPLA2Q96AD5 504 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 HERPUD2Q9BSE4 406 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ARHGAP39Q9C0H5 1083 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 MGAT4AQ9UM21 535 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 TMEM98Q9Y2Y6 226 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PCDHGB5Q9Y5G0 923 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 C4AP0C0L4 1744 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 MYH3P11055 1940 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PTGESO14684 152 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 HTR1AP08908 422 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 CHRM5P08912 532 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 OR3A3P47888 321 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 OR3A2P47893 321 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 INHBCP55103 352 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 RPS21P63220 83 aaKnown RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ST3GAL4Q11206 333 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 SLC22A15Q8IZD6 547 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 TCEANCQ8N8B7 351 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 FUBP1Q96AE4 644 aaKnown RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 KANTRA0A1W2PQU2 76 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 MBLAC1A4D2B0 266 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 J3QLW9 94 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 FHP07954 510 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 IFI30P13284 250 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF19P17023 458 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 AGXTP21549 392 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 ERP29P30040 261 aaKnown RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 EXOC3L2Q2M3D2 409 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 DLK2Q6UY11 383 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 TRUB1Q8WWH5 349 aaKnown RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 HS6ST2Q96MM7 605 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PELOQ9BRX2 385 aaKnown RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 DNAJC27Q9NZQ0 273 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 RABL2AQ9UBK7 228 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-209ENST00000545689 PRODH2Q9UF12 536 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 RABL2BQ9UNT1 228 aa12.05□□□□□ -0.48
COL4A6-209ENST00000545689 NPIPA5E9PKD4 350 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 IL3P08700 152 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GGT5P36269 586 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GINS1Q14691 196 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 HSDL2Q6YN16 418 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF627Q7L945 461 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR4E2Q8NGC2 313 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 NPIPA1Q9UND3 350 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 PHF24Q9UPV7 400 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 C2orf74A8MZ97 194 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 B4DGG1 531 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 J3QRK9 145 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 NPC1O15118 1278 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 RETP07949 1114 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GP1BBP13224 206 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ETV3P41162 512 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 WNT7BP56706 349 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 LASP1Q14847 261 aaKnown RBP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ANKRD26P1Q6NSI1 321 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 NXPE4Q6UWF7 544 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 FBXL8Q96CD0 374 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 HSPBAP1Q96EW2 488 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GPR62Q9BZJ7 368 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 MARCH7Q9H992 704 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 NUP98P52948 1817 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 CNMDO75829 334 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF432O94892 652 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 S100A6P06703 90 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 CRISP1P54107 249 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF234Q14588 700 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 SYCE2Q6PIF2 218 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GRASPQ7Z6J2 395 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 TMEM203Q969S6 136 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 S100A16Q96FQ6 103 aaKnown RBP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR2M4Q96R27 311 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ANKRD60Q9BZ19 345 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms