RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 TPOP07202 933 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 TFEBP19484 476 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 HNRNPH1P31943 449 aaKnown RBP13.16□□□□□ -0.3
DDX11-228ENST00000545115 HPDP32754 393 aaPredicted RBP13.16□□□□□ -0.3
DDX11-228ENST00000545115 RFC3P40938 356 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 SSR4P51571 173 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 TAS2R39P59534 338 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 RUNX2Q13950 521 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 MDGA2Q7Z553 956 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 ANKMY2Q8IV38 441 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 KLHL7Q8IXQ5 586 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 KLHDC8AQ8IYD2 350 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 FAM47BQ8NA70 645 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 ZFP62Q8NB50 900 aaPredicted RBP13.16□□□□□ -0.3
DDX11-228ENST00000545115 FBXO36Q8NEA4 188 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 ANKRD49Q8WVL7 239 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 CAPS2Q9BXY5 557 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 PITHD1Q9GZP4 211 aaPredicted RBP13.16□□□□□ -0.3
DDX11-228ENST00000545115 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 RHOJQ9H4E5 214 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 TIMMDC1Q9NPL8 285 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 MOCS1Q9NZB8 636 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 GPRC5BQ9NZH0 403 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 YARS2Q9Y2Z4 477 aaKnown RBP13.16□□□□□ -0.3
DDX11-228ENST00000545115 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 GTF3C1Q12789 2109 aa13.16□□□□□ -0.3
DDX11-228ENST00000545115 ANKDD1BA6NHY2 528 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 NCF1BA6NI72 391 aaPredicted RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 A8MVJ9 347 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 NCF1CA8MVU1 366 aaPredicted RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 CLEC3AO75596 197 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 TUBB4AP04350 444 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 NCF1P14598 390 aaPredicted RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 PPP2R1BP30154 601 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 GPR143P51810 404 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 GPR85P60893 370 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 ILF2Q12905 390 aaKnown RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 PDIA2Q13087 525 aaKnown RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 TGFBIQ15582 683 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 C18orf21Q32NC0 220 aaPredicted RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 ADPRMQ3LIE5 342 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 ARHGAP11AQ6P4F7 1023 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 TRIM40Q6P9F5 258 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 ACBD4Q8NC06 268 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 TMEM52Q8NDY8 209 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 OR2L5Q8NG80 312 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 CHTF18Q8WVB6 975 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 CAPZA3Q96KX2 299 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 REXO4Q9GZR2 422 aaKnown RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 NT5DC2Q9H857 520 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 ERVK-11Q9UQG0 969 aa13.15□□□□□ -0.3
DDX11-228ENST00000545115 TEP1Q99973 2627 aaKnown RBP13.15□□□□□ -0.3
DDX11-228ENST00000545115 PDZD2O15018 2839 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 E7ESA3 106 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 PRKNO60260 465 aaPredicted RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 ZFAND5O76080 213 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 CAPN3P20807 821 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 PLA2G16P53816 162 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 SLC12A2P55011 1212 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 MTTPP55157 894 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 RCN2Q14257 317 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 FASTKD3Q14CZ7 662 aaKnown RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 ELAVL1Q15717 326 aaKnown RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 TMEM211Q6ICI0 200 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 TCAIMQ8N3R3 496 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 TMEM132CQ8N3T6 1108 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 PSD4Q8NDX1 1056 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 QRFPRQ96P65 431 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 SERINC2Q96SA4 455 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 TMEM79Q9BSE2 394 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 MCMBPQ9BTE3 642 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 DERL2Q9GZP9 239 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 TP63Q9H3D4 680 aaPredicted RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 CNOT10Q9H9A5 744 aaKnown RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 COPS7BQ9H9Q2 264 aaPredicted RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
DDX11-228ENST00000545115 WWOXQ9NZC7 414 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 DAPP1Q9UN19 280 aa13.14□□□□□ -0.31
DDX11-228ENST00000545115 F8P00451 2351 aa13.13□□□□□ -0.31
DDX11-228ENST00000545115 ACOT7O00154 380 aa13.13□□□□□ -0.31
DDX11-228ENST00000545115 CYR61O00622 381 aa13.13□□□□□ -0.31
DDX11-228ENST00000545115 CLGNO14967 610 aa13.13□□□□□ -0.31
DDX11-228ENST00000545115 FANCGO15287 622 aa13.13□□□□□ -0.31
DDX11-228ENST00000545115 TP73O15350 636 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms