RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TNFRSF10CO14798 259 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 ERAL1O75616 437 aaKnown RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 GNAO1P09471 354 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 UQCRBP14927 111 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 CXCR2P25025 360 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 FASP25445 335 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 CRYBA2P53672 197 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 SLAMF1Q13291 335 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 ZIC1Q15915 447 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 FBXO42Q6P3S6 717 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 PROSER1Q86XN7 944 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 SLC44A2Q8IWA5 706 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 ZZZ3Q8IYH5 903 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 ZFP90Q8TF47 636 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 RGMAQ96B86 450 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 HRASLS2Q9NWW9 162 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 AP4B1Q9Y6B7 739 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 hCG_2039718K7EN88 272 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 CAPN5O15484 640 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 ZW10O43264 779 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 B4GALT2O60909 372 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 PRKACGP22612 351 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 CMPK1P30085 196 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 SHMT2P34897 504 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 GRK3P35626 688 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 CCR5P51681 352 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 MVDP53602 400 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 RGNQ15493 299 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 DPY19L1Q2PZI1 675 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 DEFB133Q30KQ1 61 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 AASDHQ4L235 1098 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 NDUFAF5Q5TEU4 345 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 FAM9CQ8IZT9 166 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 DUS3LQ96G46 650 aaKnown RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 TPD52L3Q96J77 140 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 PRPF18Q99633 342 aaKnown RBP13.01□□□□□ -0.33
HCFC2-202ENST00000544223 EFHD1Q9BUP0 239 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 UCKL1Q9NWZ5 548 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 OR6C2Q9NZP2 312 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 ATP6V1HQ9UI12 483 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 PCOLCE2Q9UKZ9 415 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 TTC28Q96AY4 2481 aa13.01□□□□□ -0.33
HCFC2-202ENST00000544223 UNC13CQ8NB66 2214 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 TRBC2A0A5B9 178 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 EI24O14681 340 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 PRMT3O60678 531 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 GMNNO75496 209 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 C7P10643 843 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ZNF23P17027 643 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 TRPC1P48995 793 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 CDK9P50750 372 aaKnown RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 CCT8P50990 548 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 STARD6P59095 220 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 BTN3A2P78410 334 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 PDE7AQ13946 482 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 FCRL6Q6DN72 434 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 TMEM179BQ7Z7N9 219 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ACOT4Q8N9L9 421 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 LMX1AQ8TE12 382 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 SLC47A1Q96FL8 570 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 NECAB3Q96P71 396 aaPredicted RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 IL21RQ9HBE5 538 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 FSCN3Q9NQT6 498 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ACTR10Q9NZ32 417 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 HEBP2Q9Y5Z4 205 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 THADAQ6YHU6 1953 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 RNF103-CHMP3A0A140T963 221 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 A0A1W2PR48 441 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ACOX3O15254 700 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 HNRNPRO43390 633 aaKnown RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 GPIP06744 558 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ZNF888P0CJ79 500 aaPredicted RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 IL1RNP18510 177 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 DDCP20711 480 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 CHI3L1P36222 383 aaPredicted RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 MANFP55145 182 aaKnown RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 HHEXQ03014 270 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 KLC1Q07866 573 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ZIK1Q3SY52 487 aaPredicted RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 ZNF425Q6IV72 752 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 TNFAIP8L2Q6P589 184 aaPredicted RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 PARGQ86W56 976 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 NUDT13Q86X67 352 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 OR4N5Q8IXE1 308 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 VPS37AQ8NEZ2 397 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 MAGEE2Q8TD90 523 aaPredicted RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 ZDHHC1Q8WTX9 485 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 RAB8BQ92930 207 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 REXO5Q96IC2 774 aaKnown RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 BARD1Q99728 777 aaKnown RBP13□□□□□ -0.33
HCFC2-202ENST00000544223 SH3GL1Q99961 368 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 PRDM7Q9NQW5 492 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 TMEM184CQ9NVA4 438 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms