RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 H3BQF6 201 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 BIRC5O15392 142 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 B3GALT2O43825 422 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 SCELO95171 688 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 KRT6AP02538 564 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 KRT6BP04259 564 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 RNH1P13489 461 aaKnown RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 ZNF10P21506 573 aaPredicted RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 HIST1H1TP22492 207 aaPredicted RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 KRT6CP48668 564 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 WDR4P57081 412 aaKnown RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 RCN2Q14257 317 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 ABRAXAS2Q15018 415 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 DEFB109BQ30KR1 87 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 ARL13AQ5H913 290 aaPredicted RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 OR4C11Q6IEV9 310 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 MRGPREQ86SM8 312 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 CUZD1Q86UP6 607 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 RAB43Q86YS6 212 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 ACOT4Q8N9L9 421 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 SREK1Q8WXA9 508 aaKnown RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 OR1F2PQ96R84 312 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 SERPINI1Q99574 410 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 NPLQ9BXD5 320 aaPredicted RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 MRPL1Q9BYD6 325 aaKnown RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 VN1R1Q9GZP7 353 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 CLK4Q9HAZ1 481 aaKnown RBP14.24□□□□□ -0.13
CD9-210ENST00000543916 SEMA3GQ9NS98 782 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 MKL2Q9ULH7 1088 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 POLHQ9Y253 713 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 HS3ST3B1Q9Y662 390 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 SCN2AQ99250 2005 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 FAM227AF5H4B4 570 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 SOCS6O14544 535 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 EEDO75530 441 aaKnown RBP14.23□□□□□ -0.13
CD9-210ENST00000543916 CDC123O75794 336 aaPredicted RBP14.23□□□□□ -0.13
CD9-210ENST00000543916 HEXBP07686 556 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 FHP07954 510 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 CHN1P15882 459 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 MMP11P24347 488 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 SERPINB3P29508 390 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 BSGP35613 385 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 SLC18A1P54219 525 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 EMP2P54851 167 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 LIM2P55344 173 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 CSTF3Q12996 717 aaKnown RBP14.23□□□□□ -0.13
CD9-210ENST00000543916 ATP1A4Q13733 1029 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 CHI3L2Q15782 390 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 AP5B1Q2VPB7 878 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 MINDY4Q4G0A6 757 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 MFSD4BQ5TF39 518 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 FAAH2Q6GMR7 532 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 SCIMPQ6UWF3 145 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 TMEM52Q8NDY8 209 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 MGARPQ8TDB4 240 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 TBC1D20Q96BZ9 403 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 CATSPER2Q96P56 530 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 CSF3RQ99062 836 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 PAIP2Q9BPZ3 127 aaKnown RBP14.23□□□□□ -0.13
CD9-210ENST00000543916 CENPKQ9BS16 269 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 ACPTQ9BZG2 426 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 ROGDIQ9GZN7 287 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 BRF2Q9HAW0 419 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 KCMF1Q9P0J7 381 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 DAPP1Q9UN19 280 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 SLC12A4Q9UP95 1085 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 LHX6Q9UPM6 363 aa14.23□□□□□ -0.13
CD9-210ENST00000543916 ULK1O75385 1050 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 CRCPO75575 148 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 LYPLA1O75608 230 aaPredicted RBP14.22□□□□□ -0.13
CD9-210ENST00000543916 SEMA3DO95025 777 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 SERPINE1P05121 402 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 UROSP10746 265 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 HSD3B1P14060 373 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 BGNP21810 368 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 IL10P22301 178 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 HSD3B2P26439 372 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 SERPINB5P36952 375 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 TSFMP43897 325 aaKnown RBP14.22□□□□□ -0.13
CD9-210ENST00000543916 HNRNPFP52597 415 aaKnown RBP14.22□□□□□ -0.13
CD9-210ENST00000543916 ARFIP1P53367 373 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 RAB38P57729 211 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 RHAGQ02094 409 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 GALNT1Q10472 559 aaPredicted RBP14.22□□□□□ -0.13
CD9-210ENST00000543916 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
CD9-210ENST00000543916 TBR1Q16650 682 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 TUBB8Q3ZCM7 444 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 HHATQ5VTY9 493 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 CPZQ66K79 652 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 FAM47BQ8NA70 645 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 PPP1R14CQ8TAE6 165 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 THAP4Q8WY91 577 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 EXTL1Q92935 676 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 C8orf44Q96CB5 159 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 MAPKAP1Q9BPZ7 522 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 ZNF395Q9H8N7 513 aaPredicted RBP14.22□□□□□ -0.13
CD9-210ENST00000543916 MAN2B2Q9Y2E5 1009 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 FIS1Q9Y3D6 152 aa14.22□□□□□ -0.13
CD9-210ENST00000543916 KCNMB2Q9Y691 235 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms