RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 HMGN1P05114 100 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CYBAP13498 195 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 MPIP34949 423 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CNR2P34972 360 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 KHKP50053 298 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNF33BQ06732 778 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 GINS1Q14691 196 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNHIT3Q15649 155 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 WSCD2Q2TBF2 565 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNF648Q5T619 568 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CBLL1Q75N03 491 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 PEX5LQ8IYB4 626 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 OR8H1Q8NGG4 311 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 OR52N2Q8NGI0 321 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 NUDT8Q8WV74 236 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 KATNBL1Q9H079 304 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 SMG9Q9H0W8 520 aaKnown RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 OR51V1Q9H2C8 321 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ZBTB20Q9HC78 741 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 TDP1Q9NUW8 608 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 SRRDQ9UH36 339 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CDH7Q9ULB5 785 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 PCDHGB6Q9Y5F9 930 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CFAP20Q9Y6A4 193 aaKnown RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LRRC37AA6NMS7 1700 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LTBP1Q14766 1721 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 EP400Q96L91 3159 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ATAD5Q96QE3 1844 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 HTR3EA5X5Y0 456 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 H7C0S8 307 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LEFTY2O00292 366 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 SLC16A6O15403 523 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CSNK2A2P19784 350 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 UQCRC2P22695 453 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 RCVRNP35243 200 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 HSD17B2P37059 387 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 AVPR1BP47901 424 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 FCHO2Q0JRZ9 810 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 DEFB115Q30KQ5 88 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LY6G5CQ5SRR4 150 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 IDNKQ5T6J7 187 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 PNCKQ6P2M8 343 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 OTOP2Q7RTS6 562 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 TRIM46Q7Z4K8 759 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 MARCH9Q86YJ5 346 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 SMPDL3AQ92484 453 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 TP53INP1Q96A56 240 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 NUS1Q96E22 293 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CPPED1Q9BRF8 314 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 TMEM106CQ9BVX2 250 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 TSSK6Q9BXA6 273 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 BHLHE41Q9C0J9 482 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ENPP4Q9Y6X5 453 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 A0A1W2PQ45 241 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 A0A1W2PQY0 241 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 SH3D21A4FU49 640 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 E7EQ34 232 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CAPN5O15484 640 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 OR10H2O60403 315 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 UGDHO60701 494 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 AOC2O75106 756 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CH25HO95992 272 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 IFNGP01579 166 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 PCCBP05166 539 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ACADMP11310 421 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ARL4DP49703 201 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CCR4P51679 360 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 NKX2-5P52952 324 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LGALS3BPQ08380 585 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 EIF4HQ15056 248 aaKnown RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 MEDAGQ5VYS4 303 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 AFMIDQ63HM1 303 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ING5Q8WYH8 240 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 C12orf66Q96MD2 445 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNF300Q96RE9 604 aaPredicted RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 RNF38Q9H0F5 515 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LMAN2LQ9H0V9 348 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 RBM38Q9H0Z9 239 aaKnown RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 OR51E2Q9H255 320 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 MAT2BQ9NZL9 334 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 ERVK-11Q9UQG0 969 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 CMAHPQ9Y471 501 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 A0A1B0GTL3 188 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 AGAP5A6NIR3 686 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 A8MV72 311 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 KLKB1P03952 638 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 FUCA1P04066 466 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 IL3P08700 152 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PIM1P11309 404 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CD70P32970 193 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 GGT2P36268 569 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CDH11P55287 796 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ISL1P61371 349 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 VLDLRP98155 873 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 DSC1Q08554 894 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 HNRNPA0Q13151 305 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 LASP1Q14847 261 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 MICAQ29983 383 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TBRG1Q3YBR2 411 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms