RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 RGS13O14921 159 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 PCCBP05166 539 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 ADRB3P13945 408 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 ITIH1P19827 911 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 PCMT1P22061 227 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 SERPINB10P48595 397 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 NUDT6P53370 316 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 VBP1P61758 197 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 CDC20Q12834 499 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 DMC1Q14565 340 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 ZNF234Q14588 700 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 GANABQ14697 944 aaKnown RBP14.14□□□□□ -0.15
DDX55-209ENST00000542286 ZNF658BQ4V348 819 aaPredicted RBP14.14□□□□□ -0.15
DDX55-209ENST00000542286 KDM4DQ6B0I6 523 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 HOMEZQ8IX15 550 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 OR52E4Q8NGH9 312 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 RPL3LQ92901 407 aaKnown RBP14.14□□□□□ -0.15
DDX55-209ENST00000542286 TIFAQ96CG3 184 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 C7orf34Q96L11 122 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 FAM129BQ96TA1 746 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 SLC35A5Q9BS91 424 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 CHST8Q9H2A9 424 aa14.14□□□□□ -0.15
DDX55-209ENST00000542286 ZNF99A8MXY4 864 aaPredicted RBP14.13□□□□□ -0.15
DDX55-209ENST00000542286 SLC22A1O15245 554 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 GABARAPO95166 117 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 MT-ND2P03891 347 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 SEMG1P04279 462 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 IL3P08700 152 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 NPTX1Q15818 432 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 SLC5A12Q1EHB4 618 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 EIF3MQ7L2H7 374 aaKnown RBP14.13□□□□□ -0.15
DDX55-209ENST00000542286 VN1R5Q7Z5H4 357 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 GALNT13Q8IUC8 556 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 ATL1Q8WXF7 558 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 SMG7Q92540 1137 aaKnown RBP14.13□□□□□ -0.15
DDX55-209ENST00000542286 VPS35Q96QK1 796 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 REEP1Q9H902 201 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 NEK6Q9HC98 313 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 TM9SF3Q9HD45 589 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 DMRT3Q9NQL9 472 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 PCDHGA3Q9Y5H0 932 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 PRAMEF33A0A0G2JMD5 474 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 PCDHGA12O60330 932 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 CD40LGP29965 261 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 ALDH9A1P49189 494 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 COPZ1P61923 177 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 GAB4Q2WGN9 574 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 RPS26P11Q5JNZ5 115 aaPredicted RBP14.13□□□□□ -0.15
DDX55-209ENST00000542286 TMEM240Q5SV17 173 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 PPP2R2DQ66LE6 453 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 AHSA2Q719I0 299 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 PAGE2Q7Z2X7 111 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 FAM124AQ86V42 546 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 NLRP8Q86W28 1048 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 FAR1Q8WVX9 515 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 DACH2Q96NX9 599 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 RAD9AQ99638 391 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 ZDHHC5Q9C0B5 715 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 SP140LQ9H930 580 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 DYRK1BQ9Y463 629 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 OR1A2Q9Y585 309 aa14.13□□□□□ -0.15
DDX55-209ENST00000542286 M0QX08 132 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 SUV39H1O43463 412 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 DNAJA1P31689 397 aaKnown RBP14.12□□□□□ -0.15
DDX55-209ENST00000542286 KRT20P35900 424 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 IL12RB1P42701 662 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 PPP5CP53041 499 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 ZNF540Q8NDQ6 660 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 OR9Q2Q8NGE9 314 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 OR9A1PQ8NGU1 263 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 C16orf78Q8WTQ4 265 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 CLIP3Q96DZ5 547 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 MARK1Q9P0L2 795 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 TAC3Q9UHF0 121 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 TBC1D3BA6NDS4 549 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 SLC16A6O15403 523 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 UGDHO60701 494 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 DNAJB5O75953 348 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 DLGAP3O95886 979 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 LCKP06239 509 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 EPHX1P07099 455 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 C1GALT1C1LP0DN25 315 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 PSMB9P28065 219 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 SEPHS1P49903 392 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 CDH12P55289 794 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 GABARAPL2P60520 117 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 RPP38P78345 283 aaKnown RBP14.12□□□□□ -0.15
DDX55-209ENST00000542286 KCNC3Q14003 757 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 E2F2Q14209 437 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 FAM209AQ5JX71 171 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 TTC23LQ6PF05 361 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 C11orf96Q7Z7L8 435 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 AMER3Q8N944 861 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 RHOXF1Q8NHV9 184 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 SLC5A11Q8WWX8 675 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 F2RL3Q96RI0 385 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 FEVQ99581 238 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 HCN2Q9UL51 889 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 PCDHGA10Q9Y5H3 936 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms