RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 HAUS4Q9H6D7 363 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 STOX2Q9P2F5 926 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 B4GALT7Q9UBV7 327 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 Q9UFV3 132 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 LIMA1Q9UHB6 759 aaKnown RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ATP23Q9Y6H3 246 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CCDC88CQ9P219 2028 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 MEGF8Q7Z7M0 2845 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 NUP210LQ5VU65 1888 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 A0A0A6YYC8 382 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 OR2A25A4D2G3 310 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 NPIPA2E9PIF3 369 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 F8W8V4 182 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 NPIPA3F8WFD2 350 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 H0YGG7 62 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 H0YIG0 161 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 H7C0S8 307 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 I3L1I5 382 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 TXNDC9O14530 226 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FOXS1O43638 330 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 PEX1O43933 1283 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 WDR1O75083 606 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 VPS26AO75436 327 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 PDE9AO76083 593 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 PROSCO94903 275 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 CYP1A2P05177 515 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FAHP16930 419 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 BMP7P18075 431 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 UQCRC1P31930 480 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 MC4RP32245 332 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 THBS2P35442 1172 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ARHGAP25P42331 645 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 AVPR1BP47901 424 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF140P52738 457 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ITGA8P53708 1063 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ARF3P61204 181 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ACTN3Q08043 901 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 WASHC5Q12768 1159 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 MSLNQ13421 630 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 PTK6Q13882 451 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SNTB1Q13884 538 aaKnown RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FAM53BQ14153 422 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ITIH4Q14624 930 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 BRD3Q15059 726 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SYT16Q17RD7 645 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FBXL19-AS1Q494R0 122 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 RIPPLY2Q5TAB7 128 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 HMBOX1Q6NT76 420 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FBXO42Q6P3S6 717 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 NPNTQ6UXI9 565 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 RANBP10Q6VN20 620 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 RGS9BPQ6ZS82 235 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 LANCL3Q6ZV70 420 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 UBE2R2Q712K3 238 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 TAS2R42Q7RTR8 314 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 WDR53Q7Z5U6 358 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ANKRD37Q7Z713 158 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 PCGF5Q86SE9 256 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SLC13A5Q86YT5 568 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SLC22A15Q8IZD6 547 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 OR2L3Q8NG85 312 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 OR52N2Q8NGI0 321 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 OR13C4Q8NGS5 318 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 HMGCLL1Q8TB92 370 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 ELP5Q8TE02 316 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 RAPGEF5Q92565 580 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 Q96MF0 132 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 IL17FQ96PD4 163 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 VAT1Q99536 393 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 LPAR4Q99677 370 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 MAK16Q9BXY0 300 aaKnown RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 DRC3Q9H069 523 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 PNPLA3Q9NST1 481 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SMARCAL1Q9NZC9 954 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 AIPL1Q9NZN9 384 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 KLHL8Q9P2G9 620 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 LCMT1Q9UIC8 334 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 TRHDEQ9UKU6 1024 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SLC39A10Q9ULF5 831 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
SNHG1-214ENST00000540865 FAM215AQ9Y5M1 114 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
SNHG1-214ENST00000540865 A0A1B0GVC2 190 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 LRRD1A4D1F6 860 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 PRAMEF25A6NGN4 478 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 TUBAL3A6NHL2 446 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 C3orf70A6NLC5 250 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-214ENST00000540865 LRRC53A6NM62 1247 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 CLCA1A8K7I4 914 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 HSPB2A8KAH6 182 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 CES2O00748 559 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 FCHO1O14526 889 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 SMPD2O60906 423 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 GPC4O75487 556 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 ANXA9O76027 345 aa4.28□□□□□ -1.72
SNHG1-214ENST00000540865 AGTP01019 485 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms