RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MYDGFQ969H8 173 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PPP1R14AQ96A00 147 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TBC1D20Q96BZ9 403 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 GPR21Q99679 349 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 GHITMQ9H3K2 345 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ELOVL2Q9NXB9 296 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SAMD4AQ9UPU9 718 aaKnown RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 ARL5AQ9Y689 179 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ZFP37Q9Y6Q3 630 aaPredicted RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 TTC3P53804 2025 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 HMX3A6NHT5 357 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 B8ZZF3 427 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 E9PAM4 449 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 E2F3O00716 465 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TNFRSF10BO14763 440 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 MUSKO15146 869 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 WBP4O75554 376 aaKnown RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 MTRF1O75570 445 aaKnown RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 VNN2O95498 520 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 RPN2P04844 631 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TRAPPC2P0DI81 140 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TRAPPC2BP0DI82 140 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ITGA2P17301 1181 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PPP2R1BP30154 601 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 RRM2P31350 389 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 CRISP3P54108 245 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 CREMQ03060 361 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 C19orf57Q0VDD7 668 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ILF3Q12906 894 aaKnown RBP eCLIP5.04□□□□□ -1.6
PROM1-220ENST00000540805 MAD2L1Q13257 205 aaPredicted RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 FBXO43Q4G163 708 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 MPPE1Q53F39 396 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SPANXN4Q5MJ08 99 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PRAMEF14Q5SWL7 426 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 AFMIDQ63HM1 303 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 CCDC190Q86UF4 302 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 NOXA1Q86UR1 476 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 COMMD2Q86X83 199 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ZNF280BQ86YH2 543 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 MSRB3Q8IXL7 192 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TCAIMQ8N3R3 496 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ZBTB44Q8NCP5 570 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 OR10T2Q8NGX3 314 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 GIMAP1Q8WWP7 306 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 DNASE1L2Q92874 299 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PSMG2Q969U7 264 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 Q96MT0 163 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PITX2Q99697 317 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TM9SF2Q99805 663 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SLC30A2Q9BRI3 323 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 CHCHD6Q9BRQ6 235 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 OR51E2Q9H255 320 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 CCSER2Q9H7U1 834 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 AMBNQ9NP70 447 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 PHPT1Q9NRX4 125 aaPredicted RBP5.04□□□□□ -1.6
PROM1-220ENST00000540805 SLC25A37Q9NYZ2 338 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 ABCG2Q9UNQ0 655 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 SLC27A6Q9Y2P4 619 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 RAI2Q9Y5P3 530 aa5.04□□□□□ -1.6
PROM1-220ENST00000540805 TET1Q8NFU7 2136 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 NUP214P35658 2090 aaPredicted RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 POLEQ07864 2286 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 PLXNA4Q9HCM2 1894 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 A0A0G2JN53 185 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 H3BN98 237 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 PLK4O00444 970 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 PCDHGA12O60330 932 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 NDUFS6O75380 124 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 FGF18O76093 207 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 OR7A10O76100 309 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SLITRK5O94991 958 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 IL6P05231 212 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 MMP2P08253 660 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 CNPP09543 421 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 ATXN1LP0C7T5 689 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 PRSS56P0CW18 603 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 DGKAP23743 735 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 ITPKBP27987 946 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 HOXA9P31269 272 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 GRK5P34947 590 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SLC11A1P49279 550 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 HOXC5Q00444 222 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SLC10A7Q0GE19 358 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 PTGR1Q14914 329 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 DUSP7Q16829 419 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 RFTN2Q52LD8 501 aaPredicted RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 XKR6Q5GH73 641 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 ARMCX4Q5H9R4 360 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 LUZP2Q86TE4 346 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 ENTHD1Q8IYW4 607 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 ATP6V1C2Q8NEY4 427 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 CLHC1Q8NHS4 586 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 ZNF675Q8TD23 568 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 UBASH3BQ8TF42 649 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SETD7Q8WTS6 366 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 USP7Q93009 1102 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SIPA1Q96FS4 1042 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 RNF170Q96K19 258 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 TRMT61BQ9BVS5 477 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 KLHL28Q9NXS3 571 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms