RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CD46P15529 392 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 MST1P26927 711 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 CASP2P42575 452 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 PLA2G16P53816 162 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 MTTPP55157 894 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 HSD17B7P56937 341 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 IRF8Q02556 426 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 TGM3Q08188 693 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 CHIT1Q13231 466 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 HIST2H2ACQ16777 129 aaPredicted RBP19.62■□□□□ 0.73
CHFR-217ENST00000540537 HIST2H2AA3Q6FI13 130 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 ADNP2Q6IQ32 1131 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 TMEM178AQ8NBL3 297 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 SERINC2Q96SA4 455 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 LRRC1Q9BTT6 524 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 MRPS33Q9Y291 106 aaKnown RBP19.62■□□□□ 0.73
CHFR-217ENST00000540537 ASB1Q9Y576 335 aa19.62■□□□□ 0.73
CHFR-217ENST00000540537 CROCCQ5TZA2 2017 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 CCDC189A1A4V9 331 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 SYNDIG1LA6NDD5 238 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 SUPT3HB4E1H0 165 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 CLDN4O14493 209 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 SUPT3HO75486 399 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 PMP22Q01453 160 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 OC90Q02509 493 aaPredicted RBP19.61■□□□□ 0.73
CHFR-217ENST00000540537 PCDH1Q08174 1060 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 SPINK14Q6IE38 97 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 ZNF595Q8IYB9 648 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 ARMC10Q8N2F6 343 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 UBE2E3Q969T4 207 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 RELTQ969Z4 430 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 HES7Q9BYE0 225 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 COPS7BQ9H9Q2 264 aaPredicted RBP19.61■□□□□ 0.73
CHFR-217ENST00000540537 PRTFDC1Q9NRG1 225 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 SEC14L3Q9UDX4 400 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 ACOT9Q9Y305 439 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 CLDN16Q9Y5I7 305 aa19.61■□□□□ 0.73
CHFR-217ENST00000540537 A0A087X1B8 175 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 ASPDHA6ND91 283 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 A8MUA0 341 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 UBXN8O00124 270 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 NEURL1O76050 574 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 UNC5CO95185 931 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 TPP2P29144 1249 aaPredicted RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 EEF1DP29692 281 aaKnown RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 ST13P50502 369 aaKnown RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 MLF1P58340 268 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 RCN2Q14257 317 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 WHAMMP3Q1A5X7 153 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.6■□□□□ 0.73
CHFR-217ENST00000540537 C1QL3Q5VWW1 255 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 CENPLQ8N0S6 344 aaPredicted RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 FAM47BQ8NA70 645 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 APCDD1LQ8NCL9 501 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 SRFBP1Q8NEF9 429 aaKnown RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 B3GNT7Q8NFL0 401 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 RHEBL1Q8TAI7 183 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 NXNL1Q96CM4 212 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 C16orf45Q96MC5 204 aaPredicted RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 KCNC2Q96PR1 638 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 DEFB126Q9BYW3 111 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 ROGDIQ9GZN7 287 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 TRIM45Q9H8W5 580 aaPredicted RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 KLHL1Q9NR64 748 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 LRFN1Q9P244 771 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 OPTCQ9UBM4 332 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 PPIEQ9UNP9 301 aaKnown RBP19.6■□□□□ 0.73
CHFR-217ENST00000540537 CENPEQ02224 2701 aa19.6■□□□□ 0.73
CHFR-217ENST00000540537 SYCE1LA8MT33 242 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 K7EPI3 171 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 CYR61O00622 381 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 MYO1DO94832 1006 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 SP1P08047 785 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 CERS1P27544 350 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 SERPINB1P30740 379 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 TRHRP34981 398 aaPredicted RBP19.59■□□□□ 0.73
CHFR-217ENST00000540537 PHBP35232 272 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 MSH2P43246 934 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 CLCN2P51788 898 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 HNRNPFP52597 415 aaKnown RBP19.59■□□□□ 0.73
CHFR-217ENST00000540537 LIM2P55344 173 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 RBPJQ06330 500 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 ZRSR2Q15696 482 aaKnown RBP19.59■□□□□ 0.73
CHFR-217ENST00000540537 FAM83EQ2M2I3 478 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 MROH9Q5TGP6 573 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 ZNF468Q5VIY5 522 aaPredicted RBP19.59■□□□□ 0.73
CHFR-217ENST00000540537 SLC25A25Q6KCM7 469 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 CEP128Q6ZU80 1094 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 FJX1Q86VR8 437 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 LAS2Q8IYD9 372 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 TMEM52Q8NDY8 209 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 ZNF473Q8WTR7 871 aaKnown RBP19.59■□□□□ 0.73
CHFR-217ENST00000540537 KCTD4Q8WVF5 259 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 F2RL3Q96RI0 385 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 MS4A8Q9BY19 250 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 PRDM7Q9NQW5 492 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 PNO1Q9NRX1 252 aaKnown RBP19.59■□□□□ 0.73
CHFR-217ENST00000540537 DAPP1Q9UN19 280 aa19.59■□□□□ 0.73
CHFR-217ENST00000540537 HMX2A2RU54 273 aa19.58■□□□□ 0.72
CHFR-217ENST00000540537 TGFBR3LH3BV60 316 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms