RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ZNF639Q9UID6 485 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ABT1Q9ULW3 272 aaKnown RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF780BQ9Y6R6 833 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 SAP18O00422 153 aaKnown RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 TGFB1P01137 390 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 OSMP13725 252 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 TGM1P22735 817 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 KIAA1161Q6NSJ0 714 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ADGRD2Q7Z7M1 963 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 FAM86B1Q8N7N1 296 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 Q8N9G6 341 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 DCAF4L2Q8NA75 395 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 OR52N2Q8NGI0 321 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 C1QTNF3Q9BXJ4 246 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 A0A075B6Q4 140 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 A0A1W2PQ09 198 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 RIIAD1A6NNX1 92 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 TNFRSF10AO00220 468 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OR7A10O76100 309 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 KLK1P06870 262 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 F8A1P23610 371 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 NRIP1P48552 1158 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 GINS1Q14691 196 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 LARS2Q15031 903 aaKnown RBP12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ATP13A5Q4VNC0 1218 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 CELF2-AS1Q8N7Q2 184 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OR4K1Q8NGD4 311 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 RDH8Q9NYR8 311 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 SRRDQ9UH36 339 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ASB4Q9Y574 426 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ENPP4Q9Y6X5 453 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-203ENST00000540357 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OR7A17O14581 309 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 MUSKO15146 869 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 PROM1O43490 865 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 AOC2O75106 756 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 TAS2R50P59544 299 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 RPA4Q13156 261 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 CBX2Q14781 532 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-203ENST00000540357 WDR45BQ5MNZ6 344 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 SLX4IPQ5VYV7 408 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF655Q8N720 491 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OR52E4Q8NGH9 312 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ADAMTS15Q8TE58 950 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 GSDMCQ9BYG8 508 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 TRIM36Q9NQ86 728 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ASIC5Q9NY37 505 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 CTDSP2O14595 271 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 MID1O15344 667 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 LYRM1O43325 122 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 LAMP1P11279 417 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 AMD1P17707 334 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 LIPAP38571 399 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 MRPL19P49406 292 aaKnown RBP12.51□□□□□ -0.41
DNMT1-203ENST00000540357 KIAA0319Q5VV43 1072 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 KIF18BQ86Y91 864 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 POF1BQ8WVV4 589 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 MED11Q9P086 117 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF10P21506 573 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-203ENST00000540357 GPR17Q13304 367 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 CYP27C1Q4G0S4 372 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 TMEM220Q6QAJ8 160 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 LRRTM3Q86VH5 581 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 FAM109AQ8N4B1 249 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OR2AP1Q8NGE2 309 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 PAAF1Q9BRP4 392 aa12.51□□□□□ -0.41
DNMT1-203ENST00000540357 SOCS7O14512 581 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF623O75123 536 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CD9P21926 228 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 WEE1P30291 646 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 TLX1P31314 330 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CENPAP49450 140 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 PRR5P85299 388 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF267Q14586 743 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-203ENST00000540357 PTGES3Q15185 160 aaKnown RBP12.5□□□□□ -0.41
DNMT1-203ENST00000540357 LRIT3Q3SXY7 679 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 SPATC1Q76KD6 591 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CFAP206Q8IYR0 622 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 MED30Q96HR3 178 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CROCCQ5TZA2 2017 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 SMIM30A4D0T7 59 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-203ENST00000540357 UGDHO60701 494 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 LCN1P31025 176 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ACVR1Q04771 509 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ELOAQ14241 798 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms