RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 AP5B1Q2VPB7 878 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 CRB2Q5IJ48 1285 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 DEPDC1Q5TB30 811 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 PLAG1Q6DJT9 500 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 IGFL2Q6UWQ7 119 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 LANCL3Q6ZV70 420 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 SHISA5Q8N114 240 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 ZADH2Q8N4Q0 377 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 OR52B6Q8NGF0 335 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 CCDC126Q96EE4 140 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 IMMP1LQ96LU5 166 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 NSUN5Q96P11 429 aaKnown RBP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 LPAR4Q99677 370 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 ZBTB26Q9HCK0 441 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 SEMA4BQ9NPR2 832 aaPredicted RBP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 PRDM7Q9NQW5 492 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 RNF11Q9Y3C5 154 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 V9GYY5 206 aaPredicted RBP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 DOCK10Q96BY6 2186 aa12.6□□□□□ -0.39
CCDC130-202ENST00000540216 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
CCDC130-202ENST00000540216 A0A0G2JN53 185 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 A0A1W2PPM1 405 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 BLACEA4D250 179 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 DLX3O60479 287 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SEC24DO94855 1032 aaPredicted RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SEMA3DO95025 777 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 TGFB1P01137 390 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 HIST1H1TP22492 207 aaPredicted RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 PTX3P26022 381 aaPredicted RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 CERS1P27544 350 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 CRHR1P34998 444 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SSR2P43308 183 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 RAP1GDS1P52306 607 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 PRKAA2P54646 552 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 OR4D2P58180 307 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 NAA20P61599 178 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 ACTN3Q08043 901 aaPredicted RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 IFFO1Q0D2I5 559 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 MFAP5Q13361 173 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 RUNX2Q13950 521 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 CCDC153Q494R4 210 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SFT2D3Q587I9 215 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SH2D5Q6ZV89 423 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 UBE3DQ7Z6J8 389 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 MILR1Q7Z6M3 343 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SCUBE1Q8IWY4 988 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 ZNF595Q8IYB9 648 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 MREGQ8N565 214 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 MYRIPQ8NFW9 859 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 WDR20Q8TBZ3 569 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 PPP4R1Q8TF05 950 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 TSLPQ969D9 159 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 PNPLA2Q96AD5 504 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 RGMAQ96B86 450 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 L3HYPDHQ96EM0 354 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 PTCHD1Q96NR3 888 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 LMF1Q96S06 567 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 MTERF1Q99551 399 aaKnown RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 ROPN1BQ9BZX4 212 aaPredicted RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 EPS8L2Q9H6S3 715 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 ROPN1Q9HAT0 212 aaPredicted RBP12.59□□□□□ -0.39
CCDC130-202ENST00000540216 GRID1Q9ULK0 1009 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SPACA6W5XKT8 324 aa12.59□□□□□ -0.39
CCDC130-202ENST00000540216 SMG1Q96Q15 3661 aaKnown RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 TCRBV16S1A1N1A0A5B0 115 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 OR2W5A6NFC9 320 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 J3QKU1 62 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 MLYCDO95822 493 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 IMPDH1P20839 514 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 ATP5A1P25705 553 aaKnown RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 SOX11P35716 441 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 LIM2P55344 173 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 RPS13P62277 151 aaKnown RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 IFT88Q13099 833 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 TERF2Q15554 542 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 BTBD16Q32M84 506 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 NADK2Q4G0N4 442 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 ZNF678Q5SXM1 525 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 FRG2Q64ET8 278 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 SLC6A19Q695T7 634 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 TTC19Q6DKK2 380 aaPredicted RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 OR4C11Q6IEV9 310 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 ZNF793Q6ZN11 406 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 CYP4X1Q8N118 509 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 ZCCHC7Q8N3Z6 543 aaKnown RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
CCDC130-202ENST00000540216 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 C7orf57Q8NEG2 295 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 RDH11Q8TC12 318 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 M1APQ8TC57 530 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 CDK15Q96Q40 435 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 FRG2BQ96QU4 278 aa12.58□□□□□ -0.4
CCDC130-202ENST00000540216 ZNF382Q96SR6 550 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms