RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 HTR2BP41595 481 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 KIR2DL3P43628 341 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 RORCP51449 518 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 LILRA3Q8N6C8 439 aaPredicted RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SIMC1Q8NDZ2 872 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 C11orf24Q96F05 449 aaPredicted RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 CLN6Q9NWW5 311 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 MARCH5Q9NX47 278 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 OR6C75A6NL08 312 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 ZAR1LA6NP61 321 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 TMEM189-UBE2V1I3L0A0 370 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 TNFRSF21O75509 655 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 CBLP22681 906 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 CTGFP29279 349 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 OPRD1P41143 372 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 PRIM2P49643 509 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 CRISP1P54107 249 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 HNRNPA0Q13151 305 aaKnown RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SPHARQ15513 63 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 KCNA10Q16322 511 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SYCE2Q6PIF2 218 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 LAS2Q8IYD9 372 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC6A18Q96N87 628 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SPATA6Q9NWH7 488 aaPredicted RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 MALT1Q9UDY8 824 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 CASP8AP2Q9UKL3 1982 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 RUVBL1Q9Y265 456 aaKnown RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 TRAV19A0A0A6YYK7 116 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 A0A1W2PQL4 384 aaPredicted RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 CCDC182A6NF36 153 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 MGAT4DA6NG13 374 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 FFAR1O14842 300 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 AKR7A2O43488 359 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 AP2A2O94973 939 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 LHCGRP22888 699 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 MYL9P24844 172 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 XCR1P46094 333 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 GNG2P59768 71 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 CDH18Q13634 790 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 LARS2Q15031 903 aaKnown RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 PRSS53Q2L4Q9 553 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 MPPE1Q53F39 396 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 MMP21Q8N119 569 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 SYT14Q8NB59 555 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 HJURPQ8NCD3 748 aaPredicted RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 SETD6Q8TBK2 473 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 ALG14Q96F25 216 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 ASIC4Q96FT7 647 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 ZIC5Q96T25 663 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 PIP5K1AQ99755 562 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 CWH43Q9H720 699 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 GIMAP4Q9NUV9 329 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 MKI67P46013 3256 aaKnown RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 PLA2G10O15496 165 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 LIM2P55344 173 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 PTSQ03393 145 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 NAE1Q13564 534 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC5A12Q1EHB4 618 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 MPEG1Q2M385 716 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 GLYR1Q49A26 553 aaPredicted RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 FLYWCH1Q4VC44 716 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 RPS26P11Q5JNZ5 115 aaPredicted RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 C22orf42Q6IC83 251 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 THOC6Q86W42 341 aaKnown RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 NLGN4YQ8NFZ3 816 aaPredicted RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 C9orf43Q8TAL5 461 aaPredicted RBP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 DIRAS2Q96HU8 199 aa13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCNN1A-215ENST00000540037 KPNA5O15131 536 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TMCC2O75069 709 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 MSL3P1P0C860 447 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 GPC1P35052 558 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 LIMS1P48059 325 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 RPS26P62854 115 aaKnown RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 EFR3AQ14156 821 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SEC23BQ15437 767 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TEAD4Q15561 434 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 GPR33Q49SQ1 333 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 IQCF1Q8N6M8 205 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 WFDC6Q9BQY6 131 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PLXNB3Q9ULL4 1909 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TRBC2A0A5B9 178 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 FABP12A6NFH5 140 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 OR2AG2A6NM03 316 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 NPIPB8E9PQR5 432 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms