RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 DLGAP4Q9Y2H0 992 aa11.21□□□□□ -0.61
VTN-202ENST00000539746 ZNF451Q9Y4E5 1061 aa11.21□□□□□ -0.61
VTN-202ENST00000539746 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
VTN-202ENST00000539746 EML5Q05BV3 1969 aa11.21□□□□□ -0.62
VTN-202ENST00000539746 TNRC6BQ9UPQ9 1833 aaKnown RBP11.21□□□□□ -0.62
VTN-202ENST00000539746 CACNA1IQ9P0X4 2223 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 A0A0A6YYD5 115 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 HYKKA2RU49 373 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 D6RAR5 112 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PDPK1O15530 556 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 LCMT2O60294 686 aaKnown RBP11.2□□□□□ -0.62
VTN-202ENST00000539746 RFPL3O75679 317 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 GIMD1P0DJR0 217 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 CPN2P22792 545 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 LIMK1P53667 647 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 UFM1P61960 85 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PSPHP78330 225 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 BTN3A2P78410 334 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PRR5P85299 388 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 VAC14Q08AM6 782 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 TP53BP2Q13625 1128 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PDE7AQ13946 482 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 SERTAD2Q14140 314 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PTGR1Q14914 329 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 HKDC1Q2TB90 917 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PRTGQ2VWP7 1150 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 VPS26BQ4G0F5 336 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 MTX3Q5HYI7 312 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 TMEM164Q5U3C3 297 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 FAM71E1Q6IPT2 247 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 GUSBP11Q6P575 273 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 ERICH5Q6P6B1 374 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 ASRGL1Q7L266 308 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 TRIM73Q86UV7 250 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 RIMKLAQ8IXN7 391 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 ZNF595Q8IYB9 648 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 KIAA2013Q8IYS2 634 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 DSELQ8IZU8 1212 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 SUMF1Q8NBK3 374 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 UTP15Q8TED0 518 aaKnown RBP11.2□□□□□ -0.62
VTN-202ENST00000539746 JPH3Q8WXH2 748 aaPredicted RBP11.2□□□□□ -0.62
VTN-202ENST00000539746 OR5P2Q8WZ92 322 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 RCN3Q96D15 328 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 MARK4Q96L34 752 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 CCDC115Q96NT0 180 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 DEPDC7Q96QD5 511 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 BBS4Q96RK4 519 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 LRFN3Q9BTN0 628 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
VTN-202ENST00000539746 ASPSCR1Q9BZE9 553 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 B3GNT4Q9C0J1 378 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 SYNDIG1Q9H7V2 258 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 CACYBPQ9HB71 228 aaKnown RBP11.2□□□□□ -0.62
VTN-202ENST00000539746 C3orf14Q9HBI5 128 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PCDHGB3Q9Y5G1 929 aa11.2□□□□□ -0.62
VTN-202ENST00000539746 PRAMEF33A0A0G2JMD5 474 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 A0A1W2PRB8 838 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 TTC36A6NLP5 189 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 PATE3B3GLJ2 98 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ANKRD28O15084 1053 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 B4GAT1O43505 415 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 SH3BP5O60239 455 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 GALR3O60755 368 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 CTSVO60911 334 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 BCAS2O75934 225 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 IL3P08700 152 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 FURINP09958 794 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ZNF888P0CJ79 500 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 NQO1P15559 274 aaKnown RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 CSNK2A2P19784 350 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 AGXTP21549 392 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ME2P23368 584 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 TPP2P29144 1249 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 CCKBRP32239 447 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 MANFP55145 182 aaKnown RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 RAB38P57729 211 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 EEFSECP57772 596 aaKnown RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 NCALDP61601 193 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 TNFRSF17Q02223 184 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 NDUFAF5Q5TEU4 345 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 PRR23CQ6ZRP0 262 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 VN1R4Q7Z5H5 301 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 GLRX5Q86SX6 157 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 PPP1R3BQ86XI6 285 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ZNF761Q86XN6 746 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 SCUBE1Q8IWY4 988 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 CACTIN-AS1Q8N1I8 211 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 GOLM1Q8NBJ4 401 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 RBM15BQ8NDT2 890 aaKnown RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 LRRC58Q96CX6 371 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 LRGUKQ96M69 825 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ECSITQ9BQ95 431 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 EFHD1Q9BUP0 239 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 EBPLQ9BY08 206 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 TRIM45Q9H8W5 580 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms