RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PCYOX1LQ8NBM8 494 aa15.34■□□□□ 0.05
TRAF3-204ENST00000539721 SERINC2Q96SA4 455 aa15.34■□□□□ 0.05
TRAF3-204ENST00000539721 PRPF18Q99633 342 aaKnown RBP15.34■□□□□ 0.05
TRAF3-204ENST00000539721 C1orf21Q9H246 121 aa15.34■□□□□ 0.05
TRAF3-204ENST00000539721 LYARQ9NX58 379 aaKnown RBP15.34■□□□□ 0.05
TRAF3-204ENST00000539721 SLC22A7Q9Y694 548 aa15.34■□□□□ 0.05
TRAF3-204ENST00000539721 ASPDHA6ND91 283 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 D6RAR5 112 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 B3GALT2O43825 422 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 GUCY1B2O75343 617 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 KRT16P08779 473 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 FOLR1P15328 257 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 IL1RNP18510 177 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 TGM1P22735 817 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 COL9A2Q14055 689 aaPredicted RBP15.33■□□□□ 0.04
TRAF3-204ENST00000539721 HEPACAMQ14CZ8 416 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 NDUFA9Q16795 377 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 COQ5Q5HYK3 327 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 ANKRD26P1Q6NSI1 321 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 ASRGL1Q7L266 308 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 RETREG3Q86VR2 466 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 KIF2BQ8N4N8 673 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 TTC29Q8NA56 475 aaPredicted RBP15.33■□□□□ 0.04
TRAF3-204ENST00000539721 RCBTB1Q8NDN9 531 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 OR52E6Q96RD3 313 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 SPRTNQ9H040 489 aaPredicted RBP15.33■□□□□ 0.04
TRAF3-204ENST00000539721 FANCEQ9HB96 536 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 MIEF1Q9NQG6 463 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 ATP6V1HQ9UI12 483 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 FBXW2Q9UKT8 454 aa15.33■□□□□ 0.04
TRAF3-204ENST00000539721 EXO1Q9UQ84 846 aaKnown RBP15.33■□□□□ 0.04
TRAF3-204ENST00000539721 GABRR3A8MPY1 467 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 CBFA2T3O75081 653 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 FURINP09958 794 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 PIM1P11309 404 aaPredicted RBP15.32■□□□□ 0.04
TRAF3-204ENST00000539721 ITGAXP20702 1163 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 KIR3DL1P43629 444 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 ALDH9A1P49189 494 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 TLR1Q15399 786 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 PAGE3Q5JUK9 113 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 PHF19Q5T6S3 580 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 CPTPQ5TA50 214 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 OR4F3Q6IEY1 312 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 MRM1Q6IN84 353 aaKnown RBP15.32■□□□□ 0.04
TRAF3-204ENST00000539721 SLC2A7Q6PXP3 512 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 C16orf89Q6UX73 402 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 GPR180Q86V85 440 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 EFCAB3Q8N7B9 438 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 MTERF3Q96E29 417 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 CDC6Q99741 560 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 FAIM2Q9BWQ8 316 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 ANKHQ9HCJ1 492 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 TEX10Q9NXF1 929 aaPredicted RBP15.32■□□□□ 0.04
TRAF3-204ENST00000539721 NDE1Q9NXR1 346 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 SH3BP4Q9P0V3 963 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 NAALAD2Q9Y3Q0 740 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 ASB4Q9Y574 426 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 OTOGLQ3ZCN5 2332 aa15.32■□□□□ 0.04
TRAF3-204ENST00000539721 HYKKA2RU49 373 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 GDF9O60383 454 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 FOXD2O60548 495 aaPredicted RBP15.31■□□□□ 0.04
TRAF3-204ENST00000539721 GALR3O60755 368 aaPredicted RBP15.31■□□□□ 0.04
TRAF3-204ENST00000539721 OR2B3O76000 313 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 MSL3P1P0C860 447 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 DDCP20711 480 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 CPOXP36551 454 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 PDE7AQ13946 482 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 GRM7Q14831 915 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 MAPKAPK3Q16644 382 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 DNAL1Q4LDG9 190 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 GARNL3Q5VVW2 1013 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 PRSS41Q7RTY9 318 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 SLITRK4Q8IW52 837 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 DSELQ8IZU8 1212 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 MMP21Q8N119 569 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 ARHGEF39Q8N4T4 335 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 OR1L3Q8NH93 324 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 ROPN1LQ96C74 230 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 PPCDCQ96CD2 204 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 C10orf90Q96M02 699 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 MAPKAP1Q9BPZ7 522 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 DUSP26Q9BV47 211 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 ATAD3AQ9NVI7 634 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 MAP10Q9P2G4 905 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 HCN4Q9Y3Q4 1203 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 CUL9Q8IWT3 2517 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 FITM1A5D6W6 292 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 ZNF860A6NHJ4 632 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 LAMP1P11279 417 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 PHC1P78364 1004 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 ACY1Q03154 408 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 NFYCQ13952 458 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 CCDC157Q569K6 752 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 NDUFAF5Q5TEU4 345 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 MSANTD1Q6ZTZ1 278 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 CAMKMTQ7Z624 323 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 PDSS2Q86YH6 399 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 TICAM1Q8IUC6 712 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 GPR135Q8IZ08 494 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 OR8J2Q8NGG1 315 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms