RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TTLQ8NG68 377 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 MS4A6EQ96DS6 147 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 VMP1Q96GC9 406 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 SEC16BQ96JE7 1060 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 FAR2Q96K12 515 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 CAPZA3Q96KX2 299 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 RUNDC3BQ96NL0 473 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 VKORC1Q9BQB6 163 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 TMEM79Q9BSE2 394 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 NPLQ9BXD5 320 aaPredicted RBP11.67□□□□□ -0.54
VAMP1-206ENST00000538970 RHOJQ9H4E5 214 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
VAMP1-206ENST00000538970 MTORP42345 2549 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 LRIT2A6NDA9 550 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 NCF1BA6NI72 391 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 NCF1CA8MVU1 366 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 KLRC4-KLRK1H3BQV0 150 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 PRRG2O14669 202 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 TFECO14948 347 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 ITGA10O75578 1167 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 WISP3O95389 354 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 TBX6O95947 436 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 NCF1P14598 390 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 TFEBP19484 476 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 RFC3P40938 356 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 KIR3DL1P43629 444 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 GPR143P51810 404 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 RAB38P57729 211 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 TESK1Q15569 626 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 TGFBIQ15582 683 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 ADPRMQ3LIE5 342 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 MDGA2Q7Z553 956 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 VN1R5Q7Z5H4 357 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 FAM47BQ8NA70 645 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 FAM57AQ8TBR7 257 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 CCT6BQ92526 530 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 NCLNQ969V3 563 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 VPS39Q96JC1 886 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 QRFPRQ96P65 431 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 TRIM31Q9BZY9 425 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 NT5DC2Q9H857 520 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 PRTFDC1Q9NRG1 225 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 SMYD2Q9NRG4 433 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 PNO1Q9NRX1 252 aaKnown RBP11.66□□□□□ -0.54
VAMP1-206ENST00000538970 NSMCE4AQ9NXX6 385 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 GPRC5BQ9NZH0 403 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 FBXW2Q9UKT8 454 aa11.66□□□□□ -0.54
VAMP1-206ENST00000538970 A0A088AWK7 358 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 A0A1B0GTH9 108 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 B3GALT2O43825 422 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 PEX1O43933 1283 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 HS6ST1O60243 411 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 PRKNO60260 465 aaPredicted RBP11.65□□□□□ -0.54
VAMP1-206ENST00000538970 H2AFYO75367 372 aaKnown RBP11.65□□□□□ -0.54
VAMP1-206ENST00000538970 CLEC3AO75596 197 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 ZNF10P21506 573 aaPredicted RBP11.65□□□□□ -0.54
VAMP1-206ENST00000538970 PTGS2P35354 604 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 GPR85P60893 370 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 SLC13A2Q13183 592 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 CBLBQ13191 982 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 CMPK2Q5EBM0 449 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 ADNP2Q6IQ32 1131 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 ZNF595Q8IYB9 648 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 ZBED8Q8IZ13 594 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 EID3Q8N140 333 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 KRT78Q8N1N4 520 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 TCAIMQ8N3R3 496 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 TMEM156Q8N614 296 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 ACBD4Q8NC06 268 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 OR2L5Q8NG80 312 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 C16orf52Q8NHV5 167 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 CSF3RQ99062 836 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 PITHD1Q9GZP4 211 aaPredicted RBP11.65□□□□□ -0.54
VAMP1-206ENST00000538970 DERL2Q9GZP9 239 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.54
VAMP1-206ENST00000538970 EHD1Q9H4M9 534 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 ADAP2Q9NPF8 381 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 PPT2Q9UMR5 302 aa11.65□□□□□ -0.54
VAMP1-206ENST00000538970 MRPS33Q9Y291 106 aaKnown RBP11.65□□□□□ -0.54
VAMP1-206ENST00000538970 TMEM200CA6NKL6 621 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 EFCAB8A8MWE9 144 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CCDC188H7C350 402 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CYR61O00622 381 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CLDN4O14493 209 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 TAPBPO15533 448 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CDC40O60508 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 PRAMEF4O60810 478 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 PIAS1O75925 651 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 TPOP07202 933 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 HOXB4P17483 251 aaPredicted RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CERS1P27544 350 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SSTR2P30874 369 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 HPDP32754 393 aaPredicted RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 GGT5P36269 586 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 RPL21P46778 160 aaKnown RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SSR4P51571 173 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms