RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 HS3ST3B1Q9Y662 390 aa11.83□□□□□ -0.52
CLSTN3-208ENST00000538933 KCNE2Q9Y6J6 123 aa11.83□□□□□ -0.52
CLSTN3-208ENST00000538933 AP1M2Q9Y6Q5 423 aa11.83□□□□□ -0.52
CLSTN3-208ENST00000538933 LRRC14BA6NHZ5 514 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 C2orf74A8MZ97 194 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 E7ENX8 843 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 BTN3A3O00478 584 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 NPHS1O60500 1241 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 CLDN14O95500 239 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 MLYCDO95822 493 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 RPS17P08708 135 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 CHRM5P08912 532 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 ITGAXP20702 1163 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 GGT5P36269 586 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 SLC6A12P48065 614 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 SLC1A6P48664 564 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 TNFSF10P50591 281 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 GYS2P54840 703 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 CDH13P55290 713 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 TAP2Q03519 686 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 CLCQ05315 142 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 RCN2Q14257 317 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 NKAIN1Q4KMZ8 207 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 UNC50Q53HI1 259 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 GOLGA7Q7Z5G4 137 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 ADCK2Q7Z695 626 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 C17orf64Q86WR6 236 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 OR56A3Q8NH54 315 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 PROKR1Q8TCW9 393 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 TRPC4APQ8TEL6 797 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 CHTF18Q8WVB6 975 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 ZNF75CPQ92670 426 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 DRC3Q9H069 523 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 CXXC4Q9H2H0 198 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 GSX1Q9H4S2 264 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 EPS8L2Q9H6S3 715 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 IPPKQ9H8X2 491 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 DHCR7Q9UBM7 475 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 NDOR1Q9UHB4 597 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 PCTPQ9UKL6 214 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 RTTNQ86VV8 2226 aa11.82□□□□□ -0.52
CLSTN3-208ENST00000538933 INTS1Q8N201 2190 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 MATN2O00339 956 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 OR2B3O76000 313 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ONECUT2O95948 504 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 VIMP08670 466 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ERGP11308 486 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 TSPAN8P19075 237 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 GNAZP19086 355 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 CMPK1P30085 196 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 GCGRP47871 477 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 GNGT1P63211 74 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 CSNK1G2P78368 415 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 BST1Q10588 318 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 KIR2DS3Q14952 304 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ZIC1Q15915 447 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 INAQ16352 499 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 C3AR1Q16581 482 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 TUBB8Q3ZCM7 444 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 LCTLQ6UWM7 567 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 TMPRSS11BQ86T26 416 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 GPR135Q8IZ08 494 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 LMNTD1Q8N9Z9 388 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 HMGCLL1Q8TB92 370 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ZNF483Q8TF39 744 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 PSMF1Q92530 271 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 THOC3Q96J01 351 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 MAGEB10Q96LZ2 347 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 TRMOQ9BU70 441 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 C1QTNF3Q9BXJ4 246 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 NOL11Q9H8H0 719 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ACTR8Q9H981 624 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 MRPS30Q9NP92 439 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 THAP1Q9NVV9 213 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ACTR10Q9NZ32 417 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 GPRC5BQ9NZH0 403 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 ABI3Q9P2A4 366 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 SEC14L3Q9UDX4 400 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 SH3BGRL2Q9UJC5 107 aa11.81□□□□□ -0.52
CLSTN3-208ENST00000538933 OTCP00480 354 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 DRD2P14416 443 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 PSMB5P28074 263 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 SMSP52788 366 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 ABATP80404 500 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 IRF8Q02556 426 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 LCP2Q13094 533 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 NAA25Q14CX7 972 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 ICE2Q659A1 982 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 FRMD7Q6ZUT3 714 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 GPRIN3Q6ZVF9 776 aa11.8□□□□□ -0.52
CLSTN3-208ENST00000538933 RPS27LQ71UM5 84 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms