RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TCRBV16S1A1N1A0A5B0 115 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CCDC189A1A4V9 331 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 LRIT2A6NDA9 550 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 ANKDD1BA6NHY2 528 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 SAGE2PA6NJ88 616 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 GABRR3A8MPY1 467 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CLEC3AO75596 197 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CLDN1O95832 211 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 MST1P26927 711 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CERS1P27544 350 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CASP2P42575 452 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 MAGEA12P43365 314 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 HNRNPFP52597 415 aaKnown RBP14.02□□□□□ -0.17
RAB40B-202ENST00000538809 TAS2R50P59544 299 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CHIT1Q13231 466 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 TBCCQ15814 346 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 UAP1Q16222 522 aaPredicted RBP14.02□□□□□ -0.17
RAB40B-202ENST00000538809 C4orf17Q53FE4 359 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 LRRC70Q7Z2Q7 622 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 SLC5A8Q8N695 610 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 FAM47BQ8NA70 645 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 MDS2Q8NDY4 140 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 TMEM52Q8NDY8 209 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 KIF18AQ8NI77 898 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 ELP5Q8TE02 316 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 IFT81Q8WYA0 676 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 PTCD3Q96EY7 689 aaKnown RBP14.02□□□□□ -0.17
RAB40B-202ENST00000538809 QRFPRQ96P65 431 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 GPR78Q96P69 363 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 UTP23Q9BRU9 249 aaKnown RBP14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CD244Q9BZW8 370 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 REXO4Q9GZR2 422 aaKnown RBP14.02□□□□□ -0.17
RAB40B-202ENST00000538809 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 CDCP1Q9H5V8 836 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 PRM3Q9NNZ6 103 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 KLHL1Q9NR64 748 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 WIPF3A6NGB9 483 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 TGFBR3LH3BV60 316 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 LRRTM2O43300 516 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 KLK8O60259 260 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 ACSL3O95573 720 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 COL8A1P27658 744 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 PPP2R1BP30154 601 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 CD96P40200 585 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 RAB38P57729 211 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 OC90Q02509 493 aaPredicted RBP14.01□□□□□ -0.17
RAB40B-202ENST00000538809 IRF8Q02556 426 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 OR1C1Q15619 314 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 C1QL3Q5VWW1 255 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 TRIM40Q6P9F5 258 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 GFRALQ6UXV0 394 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 ARMC2Q8NEN0 867 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 OR2L5Q8NG80 312 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 F2RL3Q96RI0 385 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 CSF3RQ99062 836 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 EFCAB11Q9BUY7 163 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 COPS7BQ9H9Q2 264 aaPredicted RBP14.01□□□□□ -0.17
RAB40B-202ENST00000538809 PRTFDC1Q9NRG1 225 aa14.01□□□□□ -0.17
RAB40B-202ENST00000538809 A0A096LPK6 155 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 B3GALT2O43825 422 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 SH3BGRLO75368 114 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 MYO1DO94832 1006 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 KLHL2O95198 593 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 PCNAP12004 261 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 TPP2P29144 1249 aaPredicted RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 MSH2P43246 934 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 SERPINB8P50452 374 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 NAA30Q147X3 362 aaPredicted RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 ACAP2Q15057 778 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 FAM83EQ2M2I3 478 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF468Q5VIY5 522 aaPredicted RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 SPINK14Q6IE38 97 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 MAMDC2Q7Z304 686 aaPredicted RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 CLNKQ7Z7G1 428 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 FJX1Q86VR8 437 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 SCUBE1Q8IWY4 988 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 PLD6Q8N2A8 252 aaKnown RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 CEP112Q8N8E3 955 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 NFAM1Q8NET5 270 aaPredicted RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 PAFAH2Q99487 392 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 NPLQ9BXD5 320 aaPredicted RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 PNO1Q9NRX1 252 aaKnown RBP14□□□□□ -0.17
RAB40B-202ENST00000538809 OPTCQ9UBM4 332 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 MMACHCQ9Y4U1 282 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 CLDN16Q9Y5I7 305 aa14□□□□□ -0.17
RAB40B-202ENST00000538809 NCOA6Q14686 2063 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 A0A088AWK7 358 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 TRBV11-1A0A0K0K1C0 115 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 MYOCOSA0A1B0GUC4 107 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 K7EPI3 171 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 WISP2O76076 250 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 UNC5CO95185 931 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 CRYABP02511 175 aaKnown RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 MYBL2P10244 700 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF10P21506 573 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 TYK2P29597 1187 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 LIM2P55344 173 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 SLC13A2Q13183 592 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 LAPTM5Q13571 262 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 SETDB1Q15047 1291 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms