RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 C21orf58P58505 322 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 ZBTB37Q5TC79 503 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 TRIQKQ629K1 86 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 FAM205BPQ63HN1 556 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 NANOGP1Q8N7R0 232 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PROKR2Q8NFJ6 384 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PIH1D2Q8WWB5 315 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 SAMD11Q96NU1 681 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 FAM193BQ96PV7 902 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 BTNL2Q9UIR0 455 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PRAMEF25A6NGN4 478 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC2A2P11168 524 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 SRCP12931 536 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 ARPP19P56211 112 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 CLDN20P56880 219 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 SNRPGP62308 76 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 C1DQ13901 141 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 ELOAQ14241 798 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 LIPKQ5VXJ0 399 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 RNLSQ5VYX0 342 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 ZNF782Q6ZMW2 699 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 AQP11Q8NBQ7 271 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 IL4I1Q96RQ9 567 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PIP5K1AQ99755 562 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 TCF25Q9BQ70 676 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 TMCC3Q9ULS5 477 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PIKFYVEQ9Y2I7 2098 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 FAM157BP0CG42 384 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 PRKAR1AP10644 381 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 GRK4P32298 578 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 TUSC3Q13454 348 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 GAB1Q13480 694 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 ZNF628Q5EBL2 1059 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 MRPL10Q7Z7H8 261 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 OR4M2Q8NGB6 313 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 LRRC20Q8TCA0 184 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 AP3S1Q92572 193 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 FBXO32Q969P5 355 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 AP2M1Q96CW1 435 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 FAM240BA0A1B0GVZ2 78 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 LINC00862A6NCI5 91 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 ARRDC5A6NEK1 342 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 WASHC1A8K0Z3 465 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 UPK3BL1B0FP48 263 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 UPK3BL2E5RIL1 263 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 SMLR1H3BR10 107 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 J3KTA2 159 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 M0QZ92 97 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 AGRPO00253 132 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC43A1O75387 559 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 PRAMEF12O95522 483 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 GSTM1P09488 218 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 CLEC2LP0C7M8 214 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 POU3F3P20264 500 aaPredicted RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 XCR1P46094 333 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 MAN2A2P49641 1150 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 MRPS6P82932 125 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 MRPL28Q13084 256 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 ANGPT1Q15389 498 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 CCL14Q16627 93 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 WSCD2Q2TBF2 565 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 GLCCI1Q86VQ1 547 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 VPS37AQ8NEZ2 397 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 CDC26Q8NHZ8 85 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 GTF3C2Q8WUA4 911 aaPredicted RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 ZBED6CLQ96FA7 236 aaPredicted RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 FUBP3Q96I24 572 aaKnown RBP eCLIP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 DCLRE1CQ96SD1 692 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 MARVELD1Q9BSK0 173 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 ASB8Q9H765 288 aa17.81■□□□□ 0.44
SFSWAP-207ENST00000538548 F8W810 466 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 TLR4O00206 839 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 GAPDHSO14556 408 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 ORC5O43913 435 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 TRBC1P01850 177 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 PDGFAP04085 211 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 ARSBP15848 533 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 POU1F1P28069 291 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 TWF1Q12792 350 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 NFATC2Q13469 925 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 TMEM201Q5SNT2 666 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 MACC1Q6ZN28 852 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 Q8N402 240 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 C9orf62Q8N4C0 152 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 UPRTQ96BW1 309 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 QRFPRQ96P65 431 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 CRISPLD1Q9H336 500 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 SNX11Q9Y5W9 270 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 CLCA3PQ9Y6N3 262 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 TRAV19A0A0A6YYK7 116 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 SCAMP2O15127 329 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 GADD45GO95257 159 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 CDH4P55283 916 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 OR8H1Q8NGG4 311 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 GEMIN6Q8WXD5 167 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 MED18Q9BUE0 208 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 NLKQ9UBE8 527 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms