RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 OR4K1Q8NGD4 311 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 TMEM41AQ96HV5 264 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 C16orf70Q9BSU1 422 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 OR51I1Q9H343 314 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 TM9SF3Q9HD45 589 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF623O75123 536 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 RBMS1P29558 406 aaKnown RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 GNG2P59768 71 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 KCNC4Q03721 635 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SNED1Q8TER0 1413 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 PEX13Q92968 403 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 KCNA7Q96RP8 456 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 TMEM121BQ9BXQ6 578 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 PCDHGB6Q9Y5F9 930 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 COL14A1Q05707 1796 aaKnown RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SOX14O95416 240 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 MT-ND5P03915 603 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF806P0C7X5 589 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 F8A1P23610 371 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 GABRA3P34903 492 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 CTBP2P56545 445 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 OR4D2P58180 307 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 UMODL1-AS1Q8N2C9 162 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 PPP4R1LQ9P1A2 415 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SCGB1D2O95969 90 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 CSTAP01040 98 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 RNH1P13489 461 aaKnown RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 DNAJB13P59910 316 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 TSTQ16762 297 aaKnown RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 WSCD2Q2TBF2 565 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 RNF111Q6ZNA4 994 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 FANK1Q8TC84 345 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 NSMAFQ92636 917 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 BIRC7Q96CA5 298 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF382Q96SR6 550 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 ZBTB26Q9HCK0 441 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SUOXP51687 545 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 FOXK1P85037 733 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SMG8Q8ND04 991 aaKnown RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 FOXJ1Q92949 421 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 PEBP4Q96S96 227 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 PTTG2Q9NZH5 202 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 CA14Q9ULX7 337 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SCO2O43819 266 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 OR2B3O76000 313 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF12P17014 697 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 VAMP1P23763 118 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 RPS15P62841 145 aaKnown RBP16.19■□□□□ 0.18
SCARB1-205ENST00000538291 SLC18A2Q05940 514 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 SEC23BQ15437 767 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 OR9I1Q8NGQ6 314 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 SHKBP1Q8TBC3 707 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 TMEM74Q96NL1 305 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 TRIB3Q96RU7 358 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 BACE2Q9Y5Z0 518 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 CIB4A0PJX0 185 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF840PA6NDX5 716 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 PROM1O43490 865 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 CBLP22681 906 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 AP2S1P53680 142 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-205ENST00000538291 PPP1R8Q12972 351 aaKnown RBP16.19■□□□□ 0.18
SCARB1-205ENST00000538291 DHCR24Q15392 516 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 EIF5AL1Q6IS14 154 aaKnown RBP16.19■□□□□ 0.18
SCARB1-205ENST00000538291 NPC1O15118 1278 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 DIRAS1O95057 198 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 OAZ2O95190 189 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 SLC10A3P09131 477 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 ACRV1P26436 265 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 JAG1P78504 1218 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 RUNX3Q13761 415 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF611Q8N823 705 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 OR6N2Q8NGY6 317 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 TMEM80Q96HE8 168 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 DCSTAMPQ9H295 470 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 ABCD2Q9UBJ2 740 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 DPPA5A6NC42 116 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 LATS1O95835 1130 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 SRCP12931 536 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF16P17020 682 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-205ENST00000538291 NTSR1P30989 418 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 IMP4Q96G21 291 aaKnown RBP16.19■□□□□ 0.18
SCARB1-205ENST00000538291 SIGLEC10Q96LC7 697 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 FTSJ1Q9UET6 329 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 GMEB1Q9Y692 573 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
SCARB1-205ENST00000538291 TSPAN9O75954 239 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SYPP08247 313 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 DEFB134Q4QY38 66 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 MSS51Q4VC12 460 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SLC35F1Q5T1Q4 408 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 KIAA0319Q5VV43 1072 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF852Q6ZMS4 543 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 TREML1Q86YW5 311 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 GATSQ8NAP1 163 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 PXYLP1Q8TE99 480 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SLC7A6OSQ96CW6 309 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-205ENST00000538291 RARRES3Q9UL19 164 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 EPCAMP16422 314 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 S1PR1P21453 382 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 S100A1P23297 94 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms