RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 PCBD2Q9H0N5 130 aa10.31□□□□□ -0.76
CLPB-208ENST00000538021 EPB41L4BQ9H329 900 aa10.31□□□□□ -0.76
CLPB-208ENST00000538021 SEMA4BQ9NPR2 832 aaPredicted RBP10.31□□□□□ -0.76
CLPB-208ENST00000538021 TREX1Q9NSU2 369 aa10.31□□□□□ -0.76
CLPB-208ENST00000538021 SACM1LQ9NTJ5 587 aa10.31□□□□□ -0.76
CLPB-208ENST00000538021 TUBA8Q9NY65 449 aaPredicted RBP10.31□□□□□ -0.76
CLPB-208ENST00000538021 MYOTQ9UBF9 498 aa10.31□□□□□ -0.76
CLPB-208ENST00000538021 ZNF629Q9UEG4 869 aaPredicted RBP10.31□□□□□ -0.76
CLPB-208ENST00000538021 EML6Q6ZMW3 1958 aa10.31□□□□□ -0.76
CLPB-208ENST00000538021 ANK2Q01484 3957 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 KDM4EB2RXH2 506 aaPredicted RBP10.3□□□□□ -0.76
CLPB-208ENST00000538021 EEF1E1-BLOC1S5C9J1V9 151 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 EEF1E1O43324 174 aaKnown RBP10.3□□□□□ -0.76
CLPB-208ENST00000538021 CRLF1O75462 422 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 GOSR1O95249 250 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 VAPBO95292 243 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 IFNB1P01574 187 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 IL2RAP01589 272 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 P04436 131 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 APRTP07741 180 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 RNH1P13489 461 aaKnown RBP10.3□□□□□ -0.76
CLPB-208ENST00000538021 PPP2R1BP30154 601 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 SKIV2L2P42285 1042 aaKnown RBP10.3□□□□□ -0.76
CLPB-208ENST00000538021 RAB8AP61006 207 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 RGS1Q08116 209 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 FOXO1Q12778 655 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 BMPR2Q13873 1038 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 HMBOX1Q6NT76 420 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 CES3Q6UWW8 571 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 PRSS57Q6UWY2 283 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 LIX1Q8N485 282 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 PRELID2Q8N945 189 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 ASB11Q8WXH4 323 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 PIGTQ969N2 578 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 PERPQ96FX8 193 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 AARSD1Q9BTE6 412 aaKnown RBP10.3□□□□□ -0.76
CLPB-208ENST00000538021 ZNF148Q9UQR1 794 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
CLPB-208ENST00000538021 GFYI3L273 518 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 EPPINO95925 133 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 MPC1LP0DKB6 136 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 CCL3P10147 92 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 CEACAM8P31997 349 aaPredicted RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 CLCN7P51798 805 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 GPR143P51810 404 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 ZNF136P52737 540 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 NAP1L1P55209 391 aaKnown RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 SORDQ00796 357 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 PWP1Q13610 501 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 TERF2Q15554 542 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 HYAL4Q2M3T9 481 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 ACSF3Q4G176 576 aaPredicted RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 POMZP3Q6PJE2 187 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 SLC35B2Q8TB61 432 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 UTP15Q8TED0 518 aaKnown RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 ALG3Q92685 438 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 MFSD3Q96ES6 412 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 SGCZQ96LD1 299 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 PIP5K1AQ99755 562 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 SLC6A15Q9H2J7 730 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 PPIEQ9UNP9 301 aaKnown RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 EIF3LQ9Y262 564 aaKnown RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 MMACHCQ9Y4U1 282 aa10.29□□□□□ -0.76
CLPB-208ENST00000538021 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 CHD3Q12873 2000 aaKnown RBP10.29□□□□□ -0.76
CLPB-208ENST00000538021 C15orf38-AP3S2A0A0A6YYH1 394 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 AHRRA9YTQ3 701 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 CASKO14936 926 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 MFAP3LO75121 409 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 F7P08709 466 aaPredicted RBP10.28□□□□□ -0.76
CLPB-208ENST00000538021 ARNTP27540 789 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 TIMP3P35625 211 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 PIGAP37287 484 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 TRPC1P48995 793 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 CCR8P51685 355 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 HK2P52789 917 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 ADARP55265 1226 aaKnown RBP10.28□□□□□ -0.76
CLPB-208ENST00000538021 NAE1Q13564 534 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 SIX1Q15475 284 aaPredicted RBP10.28□□□□□ -0.76
CLPB-208ENST00000538021 PHKG1Q16816 387 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 AGTRAPQ6RW13 159 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 HSDL2Q6YN16 418 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 CYHR1Q6ZMK1 362 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 MBOAT1Q6ZNC8 495 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 PIWIL4Q7Z3Z4 852 aaKnown RBP10.28□□□□□ -0.76
CLPB-208ENST00000538021 PRUNE1Q86TP1 453 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 LACC1Q8IV20 430 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 CA13Q8N1Q1 262 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 TBC1D19Q8N5T2 526 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 GIMAP7Q8NHV1 300 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 NT5CQ8TCD5 201 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 ATG4AQ8WYN0 398 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 DACH2Q96NX9 599 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
CLPB-208ENST00000538021 TCF12Q99081 682 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 PRTFDC1Q9NRG1 225 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 ATG4BQ9Y4P1 393 aa10.28□□□□□ -0.76
CLPB-208ENST00000538021 PCDHGB3Q9Y5G1 929 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms