RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ATG9BQ674R7 924 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CES5AQ6NT32 575 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 PRSS48Q7RTY5 328 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CCDC54Q8NEL0 328 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 MALSU1Q96EH3 234 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 GIMAP5Q96F15 307 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 DUSP26Q9BV47 211 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 PORCNQ9H237 461 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF282Q9UDV7 671 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CACNG2Q9Y698 323 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 DENND4AQ7Z401 1863 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 EEF1E1-BLOC1S5C9J1V9 151 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 EIF3FO00303 357 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 UBFD1O14562 309 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 SNRNP70P08621 437 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 UGT2B10P36537 528 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ADH7P40394 386 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 FNDC3BQ53EP0 1204 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 SLC36A4Q6YBV0 504 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 IDO2Q6ZQW0 420 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ELOVL4Q9GZR5 314 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 DZANK1Q9NVP4 752 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 APBA3O96018 575 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ALPIP09923 528 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CELP19835 753 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CHRNA5P30532 468 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 RBMXP38159 391 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CLCN4P51793 760 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 PUS10Q3MIT2 529 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 SLC39A12Q504Y0 691 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 CORO6Q6QEF8 472 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF101Q8IZC7 436 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ST8SIA4Q92187 359 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 TXNDC15Q96J42 360 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 YIPF4Q9BSR8 244 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 SAMD10Q9BYL1 202 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 NEO1Q92859 1461 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 PDGFAP04085 211 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ITGA5P08648 1049 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 UBBP0CG47 229 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 UBCP0CG48 685 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 AXLP30530 894 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 VEGFCP49767 419 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 NDUFA6P56556 154 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 PCLAFQ15004 111 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 TEX44Q53QW1 395 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 PDSS1Q5T2R2 415 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 FBXL19Q6PCT2 694 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 SGTBQ96EQ0 304 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 LRRC46Q96FV0 321 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 SAMD11Q96NU1 681 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 TFB2MQ9H5Q4 396 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 HACL1Q9UJ83 578 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ABT1Q9ULW3 272 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 LMTK2Q8IWU2 1503 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 MSI1O43347 362 aaKnown RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 HPGDSO60760 199 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 GKP32189 559 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 AQP2P41181 271 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 RSU1Q15404 277 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 TRAM1Q15629 374 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 RAB41Q5JT25 222 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 NAPRTQ6XQN6 538 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF705AQ6ZN79 300 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF563Q8TA94 476 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 P2RY13Q9BPV8 354 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 MIOSQ9NXC5 875 aa5.48□□□□□ -1.53
CSMD1-215ENST00000537824 HMGCS1Q01581 520 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RAB33AQ14088 237 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 MAD2L1BPQ15013 274 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF585AQ6P3V2 769 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SPATC1Q76KD6 591 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 MAP4K3Q8IVH8 894 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SDHAF2Q9NX18 166 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SPG21Q9NZD8 308 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 LRFN1Q9P244 771 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ASH2LQ9UBL3 628 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TIAM2Q8IVF5 1701 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SCN11AQ9UI33 1791 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TICRRQ7Z2Z1 1910 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1B0GVT2 93 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CACNB4O00305 520 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GSTM3P21266 225 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 DCKP27707 260 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 DLSTP36957 453 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PTH2RP49190 550 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 BEX3Q00994 111 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PGM2L1Q6PCE3 622 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 VASH1Q7L8A9 365 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PIM3Q86V86 326 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 C2orf73Q8N5S3 287 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 KCNQ5Q9NR82 932 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TMEM181Q9P2C4 612 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC25A14O95258 325 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CSF1RP07333 972 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 UCHL1P09936 223 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TXNRD3Q86VQ6 643 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RNF130Q86XS8 419 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZBTB2Q8N680 514 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms