RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 PHF12Q96QT6 1004 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 NAPGQ99747 312 aaPredicted RBP9.04□□□□□ -0.96
CHD4-207ENST00000537634 CCDC77Q9BR77 488 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 CAPS2Q9BXY5 557 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 PITHD1Q9GZP4 211 aaPredicted RBP9.04□□□□□ -0.96
CHD4-207ENST00000537634 DERL2Q9GZP9 239 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 AICDAQ9GZX7 198 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 CNOT10Q9H9A5 744 aaKnown RBP9.04□□□□□ -0.96
CHD4-207ENST00000537634 COPS7BQ9H9Q2 264 aaPredicted RBP9.04□□□□□ -0.96
CHD4-207ENST00000537634 PRM3Q9NNZ6 103 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 ADAP2Q9NPF8 381 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 DNAJC11Q9NVH1 559 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 GPRC5BQ9NZH0 403 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 SAR1BQ9Y6B6 198 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 PKDREJQ9NTG1 2253 aa9.04□□□□□ -0.96
CHD4-207ENST00000537634 LRIT2A6NDA9 550 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 SYNDIG1LA6NDD5 238 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 E9PLN8 166 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 CLGNO14967 610 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 TP73O15350 636 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 ZNHIT1O43257 154 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 PEX1O43933 1283 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 CDC40O60508 579 aaKnown RBP eCLIP9.03□□□□□ -0.964e-9■■■□□ 17.6
CHD4-207ENST00000537634 TFEBP19484 476 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 PTGER1P34995 402 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 RFC3P40938 356 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 RPL21P46778 160 aaKnown RBP9.03□□□□□ -0.96
CHD4-207ENST00000537634 SSR4P51571 173 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 TGM3Q08188 693 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 RUNX2Q13950 521 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 C3P1Q6ZMU1 363 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 NCCRP1Q6ZVX7 275 aaPredicted RBP9.03□□□□□ -0.96
CHD4-207ENST00000537634 DOLPP1Q86YN1 238 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 GPSM1Q86YR5 675 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 SULF2Q8IWU5 870 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 ZNF595Q8IYB9 648 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 SNX31Q8N9S9 440 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 OR2L5Q8NG80 312 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 PYROXD1Q8WU10 500 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 CDKL2Q92772 493 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 NCLNQ969V3 563 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 LURAP1Q96LR2 239 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 SERINC2Q96SA4 455 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 KRT12Q99456 494 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 VKORC1Q9BQB6 163 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 TRIM8Q9BZR9 551 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 REXO4Q9GZR2 422 aaKnown RBP9.03□□□□□ -0.96
CHD4-207ENST00000537634 EHD1Q9H4M9 534 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 NT5DC2Q9H857 520 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 CAB39LQ9H9S4 337 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 GRPEL1Q9HAV7 217 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 COQ3Q9NZJ6 369 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 PPIEQ9UNP9 301 aaKnown RBP9.03□□□□□ -0.96
CHD4-207ENST00000537634 ERVK-11Q9UQG0 969 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 SNX24Q9Y343 169 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 ASB1Q9Y576 335 aa9.03□□□□□ -0.96
CHD4-207ENST00000537634 LRBAP50851 2863 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 A0A1B0GTH9 108 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 A8MVJ9 347 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 TGFBR3LH3BV60 316 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 C19orf84I3L1E1 186 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 PHGDHO43175 533 aaKnown RBP9.02□□□□□ -0.97
CHD4-207ENST00000537634 HS6ST1O60243 411 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 STK16O75716 305 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 PIAS1O75925 651 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 ZFAND5O76080 213 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 S100BP04271 92 aaPredicted RBP9.02□□□□□ -0.97
CHD4-207ENST00000537634 TUBB4AP04350 444 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 IFNA16P05015 189 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 TPOP07202 933 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 CCDC166P0CW27 439 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 STMN1P16949 149 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 CERS1P27544 350 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 PPP2R1BP30154 601 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 SSTR2P30874 369 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 PTGS2P35354 604 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 GGT5P36269 586 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 HSPA7P48741 367 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 HNRNPFP52597 415 aaKnown RBP9.02□□□□□ -0.97
CHD4-207ENST00000537634 MTTPP55157 894 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 GPR85P60893 370 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 CALCOCO2Q13137 446 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 BMPR2Q13873 1038 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 EFTUD2Q15029 972 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD4-207ENST00000537634 CDSNQ15517 529 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 ELAVL1Q15717 326 aaKnown RBP9.02□□□□□ -0.97
CHD4-207ENST00000537634 PDK4Q16654 411 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 ADPRMQ3LIE5 342 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 FBXO48Q5FWF7 155 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 XKR6Q5GH73 641 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 CDKL4Q5MAI5 379 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 SULT1C3Q6IMI6 304 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 VN1R5Q7Z5H4 357 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 CLNKQ7Z7G1 428 aa9.02□□□□□ -0.97
CHD4-207ENST00000537634 CD163Q86VB7 1156 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms