RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SPPL2CQ8IUH8 684 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 ZNF595Q8IYB9 648 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 AMER2Q8N7J2 671 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 C7orf57Q8NEG2 295 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 OR2L5Q8NG80 312 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 MS4A6EQ96DS6 147 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PTCD3Q96EY7 689 aaKnown RBP12.27□□□□□ -0.45
RTN3-207ENST00000536011 VMP1Q96GC9 406 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PDLIM2Q96JY6 352 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 GPR22Q99680 433 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 RBBP8Q99708 897 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 EFCAB11Q9BUY7 163 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 ROGDIQ9GZN7 287 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 REXO4Q9GZR2 422 aaKnown RBP12.27□□□□□ -0.45
RTN3-207ENST00000536011 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 SAYSD1Q9NPB0 183 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 NECTIN3Q9NQS3 549 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PRTFDC1Q9NRG1 225 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 ZNF835Q9Y2P0 537 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 TRBV11-1A0A0K0K1C0 115 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 TCRBV9S1A1TA0A576 114 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 CTAGE15A4D2H0 777 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 KLRC4-KLRK1H3BQV0 150 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 PRRG2O14669 202 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 ASNA1O43681 348 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 STK16O75716 305 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 TFEBP19484 476 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 HTR1EP28566 365 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 TNFRSF8P28908 595 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 SSTR1P30872 391 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 HNRNPH1P31943 449 aaKnown RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 SPRP35270 261 aaPredicted RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 KCNC1P48547 511 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 MTTPP55157 894 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 CAV1Q03135 178 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 EFTUD2Q15029 972 aaKnown RBP eCLIP12.26□□□□□ -0.453e-9■■■■□ 23.3
RTN3-207ENST00000536011 C3AR1Q16581 482 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 XKR6Q5GH73 641 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 CTAGE6Q86UF2 777 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 SCUBE1Q8IWY4 988 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 CYP4Z2PQ8N1L4 340 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 TMEM156Q8N614 296 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 SRFBP1Q8NEF9 429 aaKnown RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 NFAM1Q8NET5 270 aaPredicted RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 UBE2E3Q969T4 207 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 KIAA1191Q96A73 305 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 KCNC2Q96PR1 638 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 SERINC2Q96SA4 455 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 ADAP2Q9NPF8 381 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 CD274Q9NZQ7 290 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 FBXW2Q9UKT8 454 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 RNF112Q9ULX5 631 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 PPIEQ9UNP9 301 aaKnown RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 UTP11Q9Y3A2 253 aaKnown RBP12.26□□□□□ -0.45
RTN3-207ENST00000536011 SPACA6W5XKT8 324 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 APCP25054 2843 aa12.26□□□□□ -0.45
RTN3-207ENST00000536011 A8MUA0 341 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 C4orf51C9J302 202 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 TFECO14948 347 aaPredicted RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 PHGDHO43175 533 aaKnown RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 ZFAND5O76080 213 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 WISP3O95389 354 aaPredicted RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 COX6B1P14854 86 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 CD1DP15813 335 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 SERPINB1P30740 379 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 STX2P32856 288 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 HSPA7P48741 367 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 SSR4P51571 173 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 PLA2G16P53816 162 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 RAB10P61026 200 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 NAB1Q13506 487 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 ELAVL1Q15717 326 aaKnown RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 TBCCQ15814 346 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 ZNF630Q2M218 657 aaPredicted RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 ADPRMQ3LIE5 342 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 ZNF468Q5VIY5 522 aaPredicted RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 C3orf62Q6ZUJ4 267 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 LRRC70Q7Z2Q7 622 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 GDF7Q7Z4P5 450 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 SIAH3Q8IW03 269 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 MCEMP1Q8IX19 187 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 CTAGE3PQ8IX95 158 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 GPALPP1Q8IXQ4 340 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 TMEM132CQ8N3T6 1108 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 CPSF7Q8N684 471 aaKnown RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 FAM47BQ8NA70 645 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 APCDD1LQ8NCL9 501 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 PDPRQ8NCN5 879 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 SPATA4Q8NEY3 305 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 DAZLQ92904 295 aaKnown RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 WDR34Q96EX3 536 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 TMEM79Q9BSE2 394 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms