RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ACBD3Q9H3P7 528 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 TMBIM4Q9HC24 238 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 NECTIN3Q9NQS3 549 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 POLEQ07864 2286 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 ICE1Q9Y2F5 2266 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 EXPH5Q8NEV8 1989 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 TCRBV16S1A1N1A0A5B0 115 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 TLDC2A0PJX2 215 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 IL10P22301 178 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 GSTM2P28161 218 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 SERPINB9P50453 376 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 STXBP1P61764 594 aaKnown RBP15.38■□□□□ 0.05
ATL3-202ENST00000535789 IRF8Q02556 426 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 NSDHLQ15738 373 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 PFKFB4Q16877 469 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 FAM83EQ2M2I3 478 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 BTBD16Q32M84 506 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 TNFAIP8L3Q5GJ75 292 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 FCRLBQ6BAA4 426 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 H3F3CQ6NXT2 135 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 ABHD17CQ6PCB6 329 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 CCDC91Q7Z6B0 441 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 SCUBE1Q8IWY4 988 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 LAS2Q8IYD9 372 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 GALNT11Q8NCW6 608 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 TTLQ8NG68 377 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 OR2L5Q8NG80 312 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 TM9SF4Q92544 642 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 PGM2Q96G03 612 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 CNDP1Q96KN2 507 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 F2RL3Q96RI0 385 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 LMF1Q96S06 567 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 REXO4Q9GZR2 422 aaKnown RBP15.38■□□□□ 0.05
ATL3-202ENST00000535789 EPS8L2Q9H6S3 715 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 PRDM7Q9NQW5 492 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 XPR1Q9UBH6 696 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 OPTCQ9UBM4 332 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 C19orf25Q9UFG5 118 aaPredicted RBP15.38■□□□□ 0.05
ATL3-202ENST00000535789 TBK1Q9UHD2 729 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 IKBKGQ9Y6K9 419 aa15.38■□□□□ 0.05
ATL3-202ENST00000535789 URADA6NGE7 173 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 TRIM49D1C9J1S8 452 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 RTCAO00442 366 aaKnown RBP15.37■□□□□ 0.05
ATL3-202ENST00000535789 E2F3O00716 465 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 H2AFYO75367 372 aaKnown RBP15.37■□□□□ 0.05
ATL3-202ENST00000535789 SH3BGRLO75368 114 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 WDPCPO95876 746 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 MYZAPP0CAP1 466 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 RNF224P0DH78 156 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 RNH1P13489 461 aaKnown RBP15.37■□□□□ 0.05
ATL3-202ENST00000535789 PPP2R1BP30154 601 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 TSFMP43897 325 aaKnown RBP15.37■□□□□ 0.05
ATL3-202ENST00000535789 PLA2G16P53816 162 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 SLC26A5P58743 744 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 ZNF169Q14929 603 aaPredicted RBP15.37■□□□□ 0.05
ATL3-202ENST00000535789 PCBP2Q15366 365 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATL3-202ENST00000535789 IRAK1BP1Q5VVH5 260 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 GRHL2Q6ISB3 625 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 NIPAL1Q6NVV3 410 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 GOLGA7Q7Z5G4 137 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 TMEM151AQ8N4L1 468 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 KIF2BQ8N4N8 673 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 TEX9Q8N6V9 391 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 DNAJB14Q8TBM8 379 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 ARL8AQ96BM9 186 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 SEC16BQ96JE7 1060 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 CPSF2Q9P2I0 782 aaKnown RBP15.37■□□□□ 0.05
ATL3-202ENST00000535789 CROCCQ5TZA2 2017 aa15.37■□□□□ 0.05
ATL3-202ENST00000535789 SPTBN1Q01082 2364 aaKnown RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 ANKDD1BA6NHY2 528 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 SYCE1LA8MT33 242 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 GFAPP14136 432 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 JAK1P23458 1154 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 CNTFP26441 200 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 TNFSF10P50591 281 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 ALDH18A1P54886 795 aaKnown RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 LIM2P55344 173 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 RAB38P57729 211 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 SKP1P63208 163 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 RPS27LQ71UM5 84 aaKnown RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 ATCAYQ86WG3 371 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 CRLF3Q8IUI8 442 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 EFCAB3Q8N7B9 438 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 PTGR2Q8N8N7 351 aaPredicted RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 FAM47BQ8NA70 645 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 NFAM1Q8NET5 270 aaPredicted RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 OR7G3Q8NG95 312 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 TLCD1Q96CP7 247 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 PTCHD1Q96NR3 888 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 NSUN5Q96P11 429 aaKnown RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 SORBS1Q9BX66 1292 aaKnown RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 CLK4Q9HAZ1 481 aaKnown RBP15.36■□□□□ 0.05
ATL3-202ENST00000535789 ZBTB26Q9HCK0 441 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 MMP25Q9NPA2 562 aa15.36■□□□□ 0.05
ATL3-202ENST00000535789 IQANK1A0A1B0GTG1 560 aa15.35■□□□□ 0.05
ATL3-202ENST00000535789 A0A1B0GTL3 188 aa15.35■□□□□ 0.05
ATL3-202ENST00000535789 CCDC189A1A4V9 331 aa15.35■□□□□ 0.05
ATL3-202ENST00000535789 GOLGA6L10A6NI86 522 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms