RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GPRC5BQ9NZH0 403 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 TINAGQ9UJW2 476 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 PTBP2Q9UKA9 531 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 PPIEQ9UNP9 301 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 TCRBV9S1A1TA0A576 114 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 SAGE2PA6NJ88 616 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 B4GALT2O60909 372 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 WDR47O94967 919 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 GSTA2P09210 222 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 CCDC166P0CW27 439 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 RNH1P13489 461 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 EPORP19235 508 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 GSTM2P28161 218 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 HNRNPH1P31943 449 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 KCNC1P48547 511 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 GPR143P51810 404 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 IST1P53990 364 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 STXBP1P61764 594 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 RUNX2Q13950 521 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 RBBP5Q15291 538 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 OR4D1Q15615 310 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 OR1C1Q15619 314 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 TOR1AIP1Q5JTV8 583 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF468Q5VIY5 522 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 SPINK14Q6IE38 97 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 TMIGD1Q6UXZ0 262 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 C3orf62Q6ZUJ4 267 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF572Q7Z3I7 529 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF227Q86WZ6 799 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 SCUBE1Q8IWY4 988 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 TCAIMQ8N3R3 496 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 SPATA6LQ8N4H0 392 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 KIF2BQ8N4N8 673 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 SLC5A8Q8N695 610 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 APCDD1LQ8NCL9 501 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 PDPRQ8NCN5 879 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ADAMTS18Q8TE60 1221 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 GAL3ST3Q96A11 431 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 PTCHD1Q96NR3 888 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 EGFL8Q99944 293 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 UTP23Q9BRU9 249 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 NPLQ9BXD5 320 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 CAPS2Q9BXY5 557 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 HES7Q9BYE0 225 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ENKD1Q9H0I2 346 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 DPH5Q9H2P9 285 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 EHD1Q9H4M9 534 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 CDCP1Q9H5V8 836 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 SAYSD1Q9NPB0 183 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF490Q9ULM2 529 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF835Q9Y2P0 537 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 MMACHCQ9Y4U1 282 aa9.41□□□□□ -0.9
CLSTN3-203ENST00000534830 RTTNQ86VV8 2226 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 NCF1BA6NI72 391 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 GABRR3A8MPY1 467 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 NCF1CA8MVU1 366 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 TGFBR3LH3BV60 316 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 PHGDHO43175 533 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 H2AFYO75367 372 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 CLEC3AO75596 197 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 UQCRHP07919 91 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 SP1P08047 785 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 NCF1P14598 390 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 CD22P20273 847 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 MAOAP21397 527 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 TPP2P29144 1249 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 TRHRP34981 398 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 GP5P40197 560 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 HNF4AP41235 474 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 CASP2P42575 452 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 ST13P50502 369 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 MLF1P58340 268 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 ATP6V0D1P61421 351 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 BTN3A2P78410 334 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 PMP22Q01453 160 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 GUCY2DQ02846 1103 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 LTBQ06643 244 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 C2orf54Q08AI8 447 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 DLG1Q12959 904 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 CALCOCO2Q13137 446 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 SLBPQ14493 270 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 GRTP1Q5TC63 336 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 SULT1C3Q6IMI6 304 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 Q6ZPB1 254 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 CAPN12Q6ZSI9 719 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 FRA10AC1Q70Z53 315 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 TMEM200AQ86VY9 491 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 RPS19BP1Q86WX3 136 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 SIAH3Q8IW03 269 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 TMEM52Q8NDY8 209 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 THAP3Q8WTV1 239 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 NRGNQ92686 78 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 CDKL2Q92772 493 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 KIAA1191Q96A73 305 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 TSPAN17Q96FV3 270 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 MAGED4Q96JG8 741 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 FRMD6Q96NE9 622 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms