RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	PGPEP1	Q9NXJ5	209 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SAMD15	Q9P1V8	674 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	LRFN1	Q9P244	771 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	PDE10A	Q9Y233	779 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	NAALAD2	Q9Y3Q0	740 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ASB1	Q9Y576	335 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SCN2A	Q99250	2005 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	FAM227A	F5H4B4	570 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	NME2P1	O60361	137 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	GALR3	O60755	368 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	RDH16	O75452	317 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	C8G	P07360	202 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC35G6	P0C7Q6	338 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	MYZAP	P0CAP1	466 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	NME2	P22392	152 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	GRK3	P35626	688 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	MAGEA3	P43357	314 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	SKP1	P63208	163 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	CBX1	P83916	185 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	SP140	Q13342	867 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	UAP1	Q16222	522 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	C21orf62-AS1	Q17RA5	79 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	UGT3A1	Q6NUS8	523 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	CASC4	Q6P4E1	433 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	AGTRAP	Q6RW13	159 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	LCTL	Q6UWM7	567 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	ZNF227	Q86WZ6	799 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	POGLUT1	Q8NBL1	392 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	AGAP11	Q8TF27	550 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	ZNF669	Q96BR6	464 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	TBC1D20	Q96BZ9	403 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	CCDC77	Q9BR77	488 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	HAUS8	Q9BT25	410 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	CDCP1	Q9H5V8	836 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	PARVB	Q9HBI1	364 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	MCCC2	Q9HCC0	563 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	SAYSD1	Q9NPB0	183 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	ABCF3	Q9NUQ8	709 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	ANKRD10	Q9NXR5	420 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	FBXO5	Q9UKT4	447 aa		10.82	□□□□□ -0.68
CTNND1-238	ENST00000534647	FEZF1	A0PJY2	475 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647		H3BQF6	201 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	PRRG2	O14669	202 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	POLR3G	O15318	223 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	EIF3H	O15372	352 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	2e-11	■□□□□ 9.6
CTNND1-238	ENST00000534647	RIPK2	O43353	540 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC25A12	O75746	678 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	HAUS5	O94927	633 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	TSPAN12	O95859	305 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	STATH	P02808	62 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	FH	P07954	510 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	NUDT17	P0C025	328 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	ABO	P16442	354 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	JAK1	P23458	1154 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC1A2	P43004	574 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	CYB561	P49447	251 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	HLCS	P50747	726 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	OR4D2	P58180	307 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	MLF1	P58340	268 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	OC90	Q02509	493 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	KRT71	Q3SY84	523 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	RNFT1	Q5M7Z0	435 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	FGD2	Q7Z6J4	655 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	CEP97	Q8IW35	865 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	CPNE9	Q8IYJ1	553 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	PDIK1L	Q8N165	341 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	EEF1AKMT1	Q8WVE0	214 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	ZBTB9	Q96C00	473 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	PEX11G	Q96HA9	241 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	AARSD1	Q9BTE6	412 aa	Known RBP	10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	CENPH	Q9H3R5	247 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	ADAMTS6	Q9UKP5	1117 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	SH2B3	Q9UQQ2	575 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	CSMD2	Q7Z408	3487 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	CELSR1	Q9NYQ6	3014 aa		10.81	□□□□□ -0.68
CTNND1-238	ENST00000534647	TRBC2	A0A5B9	178 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	CHST10	O43529	356 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	TTC4	O95801	387 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	CELA3A	P09093	270 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	ZNF24	P17028	368 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	ALOX12	P18054	663 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	IGFBP2	P18065	325 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	TPP2	P29144	1249 aa	Predicted RBP	10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	PHB	P35232	272 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	MAGEA4	P43358	317 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	RGS4	P49798	205 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	CCR8	P51685	355 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	KRTAP10-9	P60411	292 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	PDIA2	Q13087	525 aa	Known RBP	10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	NAE1	Q13564	534 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC29A2	Q14542	456 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	MAPKAPK3	Q16644	382 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	KRTAP21-3	Q3LHN1	58 aa		10.8	□□□□□ -0.68
CTNND1-238	ENST00000534647	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms