RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 NFAM1Q8NET5 270 aaPredicted RBP17.25■□□□□ 0.35
CTSB-233ENST00000534636 MS4A6EQ96DS6 147 aa17.25■□□□□ 0.35
CTSB-233ENST00000534636 VMP1Q96GC9 406 aa17.25■□□□□ 0.35
CTSB-233ENST00000534636 KRT12Q99456 494 aa17.25■□□□□ 0.35
CTSB-233ENST00000534636 REXO4Q9GZR2 422 aaKnown RBP17.25■□□□□ 0.35
CTSB-233ENST00000534636 DNAJC11Q9NVH1 559 aa17.25■□□□□ 0.35
CTSB-233ENST00000534636 RNF14Q9UBS8 474 aa17.25■□□□□ 0.35
CTSB-233ENST00000534636 TACC2O95359 2948 aa17.25■□□□□ 0.35
CTSB-233ENST00000534636 LRIT2A6NDA9 550 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 USP27XA6NNY8 438 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 CLEC3AO75596 197 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 CLDN14O95500 239 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 S100BP04271 92 aaPredicted RBP17.24■□□□□ 0.35
CTSB-233ENST00000534636 ELAVL4P26378 380 aaKnown RBP17.24■□□□□ 0.35
CTSB-233ENST00000534636 HNRNPH1P31943 449 aaKnown RBP17.24■□□□□ 0.35
CTSB-233ENST00000534636 MEOX1P50221 254 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 C18orf21Q32NC0 220 aaPredicted RBP17.24■□□□□ 0.35
CTSB-233ENST00000534636 GPSM1Q86YR5 675 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 SCUBE1Q8IWY4 988 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 ARMC10Q8N2F6 343 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 SNX31Q8N9S9 440 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 FAM47BQ8NA70 645 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 APCDD1LQ8NCL9 501 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 OR2L5Q8NG80 312 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
CTSB-233ENST00000534636 NCLNQ969V3 563 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 EHD1Q9H4M9 534 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 NT5DC2Q9H857 520 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 ADAP2Q9NPF8 381 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 SNX24Q9Y343 169 aa17.24■□□□□ 0.35
CTSB-233ENST00000534636 ITGA10O75578 1167 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 STMN1P16949 149 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 RPL21P46778 160 aaKnown RBP17.23■□□□□ 0.35
CTSB-233ENST00000534636 PLA2G16P53816 162 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 ATP6V0D1P61421 351 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 HSF1Q00613 529 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 PAGE2BQ5JRK9 111 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 CDKL4Q5MAI5 379 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 SULT1C3Q6IMI6 304 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 ZNF595Q8IYB9 648 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 MTFMTQ96DP5 389 aaKnown RBP17.23■□□□□ 0.35
CTSB-233ENST00000534636 SERINC2Q96SA4 455 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 CPNE1Q99829 537 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 AICDAQ9GZX7 198 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 CAB39LQ9H9S4 337 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 TIMMDC1Q9NPL8 285 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 CD274Q9NZQ7 290 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 ERVK-11Q9UQG0 969 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 CSMD2Q7Z408 3487 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 FBN2P35556 2912 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 OTOGQ6ZRI0 2925 aa17.23■□□□□ 0.35
CTSB-233ENST00000534636 TP73O15350 636 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 CDC40O60508 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
CTSB-233ENST00000534636 STK16O75716 305 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 IFNA16P05015 189 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 CCDC166P0CW27 439 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 TFEBP19484 476 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 SSR4P51571 173 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 MTTPP55157 894 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 RUNX2Q13950 521 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 PDK4Q16654 411 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 HIST2H2ACQ16777 129 aaPredicted RBP17.22■□□□□ 0.35
CTSB-233ENST00000534636 XKR6Q5GH73 641 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 HIST2H2AA3Q6FI13 130 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 CLNKQ7Z7G1 428 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 TMEM132CQ8N3T6 1108 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 SPATA6LQ8N4H0 392 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 PHF10Q8WUB8 498 aaKnown RBP17.22■□□□□ 0.35
CTSB-233ENST00000534636 PTCD3Q96EY7 689 aaKnown RBP17.22■□□□□ 0.35
CTSB-233ENST00000534636 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 EFCAB11Q9BUY7 163 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 ROGDIQ9GZN7 287 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 SAYSD1Q9NPB0 183 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 RNF112Q9ULX5 631 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 MTO1Q9Y2Z2 717 aaKnown RBP17.22■□□□□ 0.35
CTSB-233ENST00000534636 CLCA3PQ9Y6N3 262 aa17.22■□□□□ 0.35
CTSB-233ENST00000534636 A8MVJ9 347 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 E9PLN8 166 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 EIF3HO15372 352 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTSB-233ENST00000534636 PHGDHO43175 533 aaKnown RBP17.21■□□□□ 0.35
CTSB-233ENST00000534636 PEX1O43933 1283 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 PIAS1O75925 651 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 ZFAND5O76080 213 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 TUBB4AP04350 444 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 CERS1P27544 350 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 GGT5P36269 586 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 KCNC1P48547 511 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 HSPA7P48741 367 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 LAPTM5Q13571 262 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 BMPR2Q13873 1038 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 EFTUD2Q15029 972 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■■■□□ 19
CTSB-233ENST00000534636 ELAVL1Q15717 326 aaKnown RBP17.21■□□□□ 0.35
CTSB-233ENST00000534636 RNFT1Q5M7Z0 435 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 MAATS1Q7Z4T9 603 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 ZNF227Q86WZ6 799 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 SULF2Q8IWU5 870 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 GPALPP1Q8IXQ4 340 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 ASB15Q8WXK1 588 aa17.21■□□□□ 0.35
CTSB-233ENST00000534636 DAZLQ92904 295 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms