RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RGSL1A5PLK6 1076 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ASPDHA6ND91 283 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MBD3L4A6NDZ8 208 aaPredicted RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MBD3L5A6NJ08 208 aaPredicted RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 USP27XA6NNY8 438 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM171A2A8MVW0 826 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TMCO5BA8MYB1 307 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 KDM4EB2RXH2 506 aaPredicted RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 NPIPA2E9PIF3 369 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 NPIPA3F8WFD2 350 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MAP2K7O14733 419 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PSMA7O14818 248 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 RASGRF2O14827 1237 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SGTAO43765 313 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 VEGFDO43915 354 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 HS6ST1O60243 411 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ZRANB2O95218 330 aaKnown RBP eCLIP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SIX3O95343 332 aaPredicted RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 LSM8O95777 96 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GPANK1O95872 356 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ONECUT2O95948 504 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 HLA-DQB2P05538 268 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SP1P08047 785 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ELANEP08246 267 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CD63P08962 238 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 RAP2AP10114 183 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 VCLP18206 1134 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ENPP1P22413 925 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PSMA2P25787 234 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 EEF1DP29692 281 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PEBP1P30086 187 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MIPP30301 263 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CRHR1P34998 444 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CARSP49589 748 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 AGFG1P52594 562 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 EMP2P54851 167 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 WNT3P56703 355 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 DCAF7P61962 342 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MAT1AQ00266 395 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GTF2H3Q13889 308 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MESDQ14696 234 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 INAQ16352 499 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SRSF7Q16629 238 aaKnown RBP eCLIP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MAPKAPK3Q16644 382 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SYT16Q17RD7 645 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC5A12Q1EHB4 618 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GFOD2Q3B7J2 385 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GXYLT1Q4G148 440 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 COBLL1Q53SF7 1204 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CMPK2Q5EBM0 449 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ACER2Q5QJU3 275 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 WASHC2DQ5SRD0 308 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ERMARDQ5T6L9 678 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GPRC6AQ5T6X5 926 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHDC7AQ5VTJ3 777 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 NXNQ6DKJ4 435 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 RTL6Q6ICC9 239 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC25A25Q6KCM7 469 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TLDC1Q6P9B6 456 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SPESP1Q6UW49 350 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 KDELC1Q6UW63 502 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM151BQ6UXP7 276 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 YTHDF3Q7Z739 585 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 AMIGO1Q86WK6 493 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CRLF3Q8IUI8 442 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 P3H2Q8IVL5 708 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CLYBLQ8N0X4 340 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 OR4N4Q8N0Y3 316 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 NDUFAF2Q8N183 169 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GHDCQ8N2G8 530 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TEX26Q8N6G2 289 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 MDS2Q8NDY4 140 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ACVR1CQ8NER5 493 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 OR5AR1Q8NGP9 310 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC35B2Q8TB61 432 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF480Q8WV37 535 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TEKT4Q8WW24 435 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PERPQ96FX8 193 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 IMMP1LQ96LU5 166 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF778Q96MU6 729 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TTC25Q96NG3 672 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIB3Q96RU7 358 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 LYSMD1Q96S90 227 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 NEU1Q99519 415 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 C17orf62Q9BQA9 187 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TUBGCP2Q9BSJ2 902 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CNPY3Q9BT09 278 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 HGH1Q9BTY7 390 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CNPPD1Q9BV87 410 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GPR63Q9BZJ6 419 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PLA2G12AQ9BZM1 189 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TSPY26PQ9H489 355 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SYTL2Q9HCH5 934 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GALNT9Q9HCQ5 603 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PNPLA3Q9NST1 481 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CUTCQ9NTM9 273 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SEPT11Q9NVA2 429 aaKnown RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 TMEM51Q9NW97 253 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ALKBH4Q9NXW9 302 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms