RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SNX6Q9UNH7 406 aa11.31□□□□□ -0.6
SSBP3-214ENST00000533209 SCN3AQ9NY46 2000 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 OR2W5A6NFC9 320 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 GOLGA6L10A6NI86 522 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 ARGFXA6NJG6 315 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 TM9SF1O15321 606 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 CYC1P08574 325 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 DHRS4L1P0CG22 281 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-214ENST00000533209 BSGP35613 385 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 SSR2P43308 183 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 SERPINB4P48594 390 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 HTR6P50406 440 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 RAP1GDS1P52306 607 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 ARFIP1P53367 373 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 FOXA1P55317 472 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
SSBP3-214ENST00000533209 RHAGQ02094 409 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 MINDY4Q4G0A6 757 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 CPZQ66K79 652 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 KIRREL2Q6UWL6 708 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 MED25Q71SY5 747 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 HDXQ7Z353 690 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 APLFQ8IW19 511 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-214ENST00000533209 ACOT4Q8N9L9 421 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 OR6Y1Q8NGX8 325 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 APOBEC4Q8WW27 367 aaKnown RBP11.3□□□□□ -0.6
SSBP3-214ENST00000533209 SELENOMQ8WWX9 145 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 TRMOQ9BU70 441 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 COPS7BQ9H9Q2 264 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-214ENST00000533209 KCNK9Q9NPC2 374 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 KCMF1Q9P0J7 381 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 DAPP1Q9UN19 280 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 TIMM22Q9Y584 194 aa11.3□□□□□ -0.6
SSBP3-214ENST00000533209 LOC102723996A0A087X1L8 192 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 A0A1W2PQ72 361 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 H3BQF6 201 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 MASP2O00187 686 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 PSMD12O00232 456 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-214ENST00000533209 CYR61O00622 381 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 NPHS1O60500 1241 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 B4GALT2O60909 372 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 ALOX12BO75342 701 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 EEDO75530 441 aaKnown RBP11.29□□□□□ -0.6
SSBP3-214ENST00000533209 CDC123O75794 336 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-214ENST00000533209 SEMA3DO95025 777 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 ZWINTO95229 277 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 KRT6AP02538 564 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 KRT6BP04259 564 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 HMOX2P30519 316 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 TSFMP43897 325 aaKnown RBP11.29□□□□□ -0.6
SSBP3-214ENST00000533209 KRT6CP48668 564 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 LIM2P55344 173 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 RAB38P57729 211 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 CHAF1BQ13112 559 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 DCAF10Q5QP82 559 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 MFSD4BQ5TF39 518 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 AGBL2Q5U5Z8 902 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 FAAH2Q6GMR7 532 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 TMEM205Q6UW68 189 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 ATG14Q6ZNE5 492 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 TMEM102Q8N9M5 508 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-214ENST00000533209 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 PLPP5Q8NEB5 264 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 OR11G2Q8NGC1 345 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 C8orf44Q96CB5 159 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 PKNOX2Q96KN3 472 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 HBEGFQ99075 208 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 MAPKAP1Q9BPZ7 522 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 ING2Q9H160 280 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 DDX31Q9H8H2 851 aaKnown RBP11.29□□□□□ -0.6
SSBP3-214ENST00000533209 VIPAS39Q9H9C1 493 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 LYRM4Q9HD34 91 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 FBXL4Q9UKA2 621 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 SLC12A4Q9UP95 1085 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 CCDC88CQ9P219 2028 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 PIEZO2Q9H5I5 2752 aa11.29□□□□□ -0.6
SSBP3-214ENST00000533209 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 TMEM120BA0PK00 339 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 SERTM1A2A2V5 107 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 PEX12O00623 359 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 PCDH17O14917 1159 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 BIRC5O15392 142 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 TMPRSS11DO60235 418 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ULK1O75385 1050 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 DNAJB5O75953 348 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 CHRNGP07510 517 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 FAM87AP0C7U9 286 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms